RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PCDHB4Q9Y5E5 795 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 EPHB3P54753 998 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 CYP27A1Q02318 531 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 NR1I3Q14994 352 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 MGAT5BQ3V5L5 792 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 ATAT1Q5SQI0 421 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 RARS2Q5T160 578 aaKnown RBP21.24■□□□□ 0.99
SF1-213ENST00000472725 SLC4A11Q8NBS3 891 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 TWNKQ96RR1 684 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 HNRNPABQ99729 332 aaKnown RBP21.24■□□□□ 0.99
SF1-213ENST00000472725 LSM14BQ9BX40 385 aaKnown RBP21.24■□□□□ 0.99
SF1-213ENST00000472725 CEP72Q9P209 647 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 DNAJC12Q9UKB3 198 aa21.24■□□□□ 0.99
SF1-213ENST00000472725 H3BQ06 376 aaPredicted RBP21.23■□□□□ 0.99
SF1-213ENST00000472725 TRIM66O15016 1216 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 RFPL2O75678 378 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 TPM3P06753 285 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 UCHL3P15374 230 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 UBASH3AP57075 661 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 SYCP1Q15431 976 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 STILQ15468 1287 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 ARHGAP17Q68EM7 881 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 TMEM270Q6UE05 265 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 ITIH5Q86UX2 942 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 LEMD2Q8NC56 503 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 SHC3Q92529 594 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 SUSD6Q92537 303 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 SMG7Q92540 1137 aaKnown RBP21.23■□□□□ 0.99
SF1-213ENST00000472725 KAT5Q92993 513 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 ZNF707Q96C28 371 aaPredicted RBP21.23■□□□□ 0.99
SF1-213ENST00000472725 CYFIP2Q96F07 1278 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 SMARCD1Q96GM5 515 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 HEXIM2Q96MH2 286 aaKnown RBP21.23■□□□□ 0.99
SF1-213ENST00000472725 SEPT5Q99719 369 aaPredicted RBP21.23■□□□□ 0.99
SF1-213ENST00000472725 B3GNT5Q9BYG0 378 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 CRISPLD1Q9H336 500 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 SLC27A5Q9Y2P5 690 aa21.23■□□□□ 0.99
SF1-213ENST00000472725 MBTPS2O43462 519 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 VDRP11473 427 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 CYP2F1P24903 491 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 ZNF132P52740 706 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 TWF1Q12792 350 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 VEPH1Q14D04 833 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 ZNF394Q53GI3 561 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 IQCEQ6IPM2 695 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 TMC5Q6UXY8 1006 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 FUKQ8N0W3 1084 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 C12orf76Q8N812 135 aaPredicted RBP21.22■□□□□ 0.99
SF1-213ENST00000472725 NEK11Q8NG66 645 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 SPATA17Q96L03 361 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 C8orf48Q96LL4 319 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 ZNF512Q96ME7 567 aaPredicted RBP21.22■□□□□ 0.99
SF1-213ENST00000472725 NAP1L5Q96NT1 182 aaPredicted RBP21.22■□□□□ 0.99
SF1-213ENST00000472725 NAA15Q9BXJ9 866 aaKnown RBP21.22■□□□□ 0.99
SF1-213ENST00000472725 PIDD1Q9HB75 910 aa21.22■□□□□ 0.99
SF1-213ENST00000472725 AVENQ9NQS1 362 aaPredicted RBP21.22■□□□□ 0.99
SF1-213ENST00000472725 PTPN2P17706 415 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 BDNFP23560 247 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 MRPS5P82675 430 aaKnown RBP21.21■□□□□ 0.99
SF1-213ENST00000472725 SGO2Q562F6 1265 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 FAM35AQ86V20 835 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 RBBP8NLQ8NC74 664 aaPredicted RBP21.21■□□□□ 0.99
SF1-213ENST00000472725 RNF214Q8ND24 703 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.21■□□□□ 0.99
SF1-213ENST00000472725 PCMTD1Q96MG8 357 aaPredicted RBP21.21■□□□□ 0.99
SF1-213ENST00000472725 STK33Q9BYT3 514 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 GANQ9H2C0 597 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 CSNK1G1Q9HCP0 422 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 EHD2Q9NZN4 543 aa21.21■□□□□ 0.99
SF1-213ENST00000472725 C2orf16Q68DN1 1984 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 TEX33O43247 280 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 CBFA2T2O43439 604 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 NOL4O94818 638 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 CSH1P0DML2 217 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 CSH2P0DML3 217 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 ANXA13P27216 316 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 BPIFB4P59827 614 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 SMAD2Q15796 467 aaKnown RBP21.2■□□□□ 0.98
SF1-213ENST00000472725 MEA1Q16626 185 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 ARHGAP44Q17R89 818 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 GJB7Q6PEY0 223 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 PAQR9Q6ZVX9 377 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 FMNL3Q8IVF7 1028 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 TTC9BQ8N6N2 239 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 C12orf29Q8N999 325 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 SLC2A14Q8TDB8 520 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 PSMG2Q969U7 264 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 IQCDQ96DY2 449 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 MED10Q9BTT4 135 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 WDR6Q9NNW5 1121 aaKnown RBP21.2■□□□□ 0.98
SF1-213ENST00000472725 PNPLA8Q9NP80 782 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 PRDM6Q9NQX0 595 aa21.2■□□□□ 0.98
SF1-213ENST00000472725 FAM207AQ9NSI2 230 aaPredicted RBP21.2■□□□□ 0.98
SF1-213ENST00000472725 USP15Q9Y4E8 981 aaPredicted RBP21.2■□□□□ 0.98
SF1-213ENST00000472725 REV3LO60673 3130 aa21.19■□□□□ 0.98
SF1-213ENST00000472725 GRXCR2A6NFK2 248 aa21.19■□□□□ 0.98
SF1-213ENST00000472725 CCL16O15467 120 aa21.19■□□□□ 0.98
SF1-213ENST00000472725 FGF19O95750 216 aa21.19■□□□□ 0.98
SF1-213ENST00000472725 FAM200BP0CF97 657 aa21.19■□□□□ 0.98
SF1-213ENST00000472725 KRT5P13647 590 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms