RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PWWP2AQ96N64 755 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 WDFY2Q96P53 400 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ABHD1Q96SE0 405 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 HEMGNQ9BXL5 484 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 TTYH3Q9C0H2 523 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 SENP6Q9GZR1 1112 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 ABHD16BQ9H3Z7 469 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 RETREG1Q9H6L5 497 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 PLEKHA2Q9HB19 425 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ATP8A2Q9NTI2 1148 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 FBXO34Q9NWN3 711 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ZNF215Q9UL58 517 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 CORO1CQ9ULV4 474 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 FRMD4BQ9Y2L6 1034 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 TMEM98Q9Y2Y6 226 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 MTO1Q9Y2Z2 717 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 SNX5Q9Y5X3 404 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CNTLNQ9NXG0 1405 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CCDC78A2IDD5 438 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 URADA6NGE7 173 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ZNF839A8K0R7 811 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 A8MV72 311 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 SYN3O14994 580 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 DAPK3O43293 454 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 KLHL18O94889 574 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ITGA2BP08514 1039 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ITGA5P08648 1049 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 DBHP09172 617 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 LYL1P12980 280 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 RARGP13631 454 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 C6P13671 934 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 HGFP14210 728 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ALOX15P16050 662 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 BTF3P20290 206 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 MUTP22033 750 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 GJA4P35212 333 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 PTPN7P35236 360 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CASRP41180 1078 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 PTDSS1P48651 473 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 ZNF135P52742 658 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 KRT17Q04695 432 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 DUSP8Q13202 625 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 BMP2KLQ5H9B9 411 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 FAM69AQ5T7M9 428 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 GADL1Q6ZQY3 521 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 PXKQ7Z7A4 578 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 TTC39CQ8N584 583 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ARL10Q8N8L6 244 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 CYP2W1Q8TAV3 490 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 BRIX1Q8TDN6 353 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 TMEM171Q8WVE6 324 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 LENG1Q96BZ8 264 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 NEIL1Q96FI4 390 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 RBM17Q96I25 401 aaKnown RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 TRAPPC9Q96Q05 1148 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 MED15Q96RN5 788 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 TLR10Q9BXR5 811 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 HAPLN2Q9GZV7 340 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 MS4A7Q9GZW8 240 aaPredicted RBP2.99□□□□□ -1.93
XRN1-210ENST00000472697 NOD2Q9HC29 1040 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 COQ3Q9NZJ6 369 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 ZFP69BQ9UJL9 534 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 PCDHB7Q9Y5E2 793 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 RPTORQ8N122 1335 aa2.99□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A18PA6NE21 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A16PA6NEW6 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A9PA6NNJ1 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A5PA8MXJ8 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 MASP2O00187 686 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 TBC1D4O60343 1298 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 STARD3NLO95772 234 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 DDX58O95786 925 aaKnown RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 PROCP04070 461 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 GJB1P08034 283 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 PDHA1P08559 390 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A15PP0C7V4 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A14PP0C7W9 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 IL12RB1P42701 662 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 HERVK_113P62684 666 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 AP2B1P63010 937 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 PRR5P85299 388 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 DDR1Q08345 913 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 RASA2Q15283 850 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 TARBP2Q15633 366 aaKnown RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 PLA1AQ53H76 456 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 CCDC92Q53HC0 331 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM133BQ5BKY9 247 aaKnown RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 SLC30A6Q6NXT4 461 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 PLBD1Q6P4A8 553 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 CRELD2Q6UXH1 353 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 ZNF783Q6ZMS7 281 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 C22orf34Q6ZV56 151 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 LARP4Q71RC2 724 aaKnown RBP eCLIP2.98□□□□□ -1.93
XRN1-210ENST00000472697 SZRD1Q7Z422 152 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ADGRA1Q86SQ6 560 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 GLB1L2Q8IW92 636 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 SLC44A2Q8IWA5 706 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 NKAIN3Q8N8D7 197 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms