RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	UBL4B	Q8N7F7	174 aa		11.38	□□□□□ -0.59
MRPS18B-208	ENST00000472267	B3GALNT2	Q8NCR0	500 aa		11.38	□□□□□ -0.59
MRPS18B-208	ENST00000472267	IPO4	Q8TEX9	1081 aa	Known RBP	11.38	□□□□□ -0.59
MRPS18B-208	ENST00000472267	KRT35	Q92764	455 aa		11.38	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MCEE	Q96PE7	176 aa		11.38	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MED10	Q9BTT4	135 aa		11.38	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MIF4GD	A9UHW6	222 aa	Known RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267		F8W810	466 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TULP2	O00295	520 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	B4GALT3	O60512	393 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PROSC	O94903	275 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ITGB1	P05556	798 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CLTB	P09497	229 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	FAM163B	P0C2L3	166 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	LHX1	P48742	406 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MARCKSL1	P49006	195 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	RPL7A	P62424	266 aa	Known RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PDE4C	Q08493	712 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ZNF211	Q13398	564 aa	Predicted RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CCDC142	Q17RM4	750 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	LRRC26	Q2I0M4	334 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MDH1B	Q5I0G3	518 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	OR6B2	Q6IFH4	312 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	DCLRE1A	Q6PJP8	1040 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	METTL23	Q86XA0	190 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	XYLT1	Q86Y38	959 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ANKLE1	Q8NAG6	615 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	NOA1	Q8NC60	698 aa	Known RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	C3orf20	Q8ND61	904 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	SLC2A14	Q8TDB8	520 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	SYT15	Q9BQS2	421 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	EPC1	Q9H2F5	836 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ELAC1	Q9H777	363 aa	Known RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	METTL5	Q9NRN9	209 aa	Known RBP	11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TBC1D13	Q9NVG8	400 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	KANSL3	Q9P2N6	904 aa		11.37	□□□□□ -0.59
MRPS18B-208	ENST00000472267	KIAA0100	Q14667	2235 aa	Known RBP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TCRBV5S1A1T	A0A578	114 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TMEM191C	A6NGB0	347 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267		E5RJQ4	531 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CLDN5	O00501	218 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	GABRD	O14764	452 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PARN	O95453	639 aa	Known RBP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CXCL10	P02778	98 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	RHOXF2B	P0C7M4	288 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	KRT3	P12035	628 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TKT	P29401	623 aa	Known RBP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	AARS	P49588	968 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	BCAT1	P54687	386 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TAP1	Q03518	808 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	BST2	Q10589	180 aa	Known RBP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ZNF268	Q14587	947 aa	Predicted RBP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	DCAF12L1	Q5VU92	463 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	C1orf53	Q5VUE5	145 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	KIAA0319	Q5VV43	1072 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	DAB2IP	Q5VWQ8	1189 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PMF1	Q6P1K2	205 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CD300LG	Q6UXG3	332 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	COLGALT2	Q8IYK4	626 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ANKRD52	Q8NB46	1076 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	RSPH1	Q8WYR4	309 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	ALG3	Q92685	438 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	RHOXF2	Q9BQY4	288 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TMEM106C	Q9BVX2	250 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	WDR35	Q9P2L0	1181 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	RNF14	Q9UBS8	474 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	DNAJB4	Q9UDY4	337 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	IP6K2	Q9UHH9	426 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TBX21	Q9UL17	535 aa		11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.36	□□□□□ -0.59
MRPS18B-208	ENST00000472267	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	SIGLEC16	A6NMB1	481 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CES2	O00748	559 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	SETSIP	P0DME0	302 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CTNNA2	P26232	953 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	GJC1	P36383	396 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	SLC1A1	P43005	524 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	GABRB2	P47870	512 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	DSC1	Q08554	894 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PKDCC	Q504Y2	493 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PPP1R15B	Q5SWA1	713 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	FAM183BP	Q6ZVS7	135 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	SPATA4	Q8NEY3	305 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	JOSD2	Q8TAC2	188 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CD101	Q93033	1021 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	RPGRIP1	Q96KN7	1286 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CASD1	Q96PB1	797 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MIS12	Q9H081	205 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CRTAC1	Q9NQ79	661 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TTC3	P53804	2025 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TSC2	P49815	1807 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	MICAL3	Q7RTP6	2002 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	CCDC66	A2RUB6	948 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	TBKBP1	A7MCY6	615 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267		M0QZQ0	153 aa		11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	PGRMC1	O00264	195 aa	Known RBP	11.35	□□□□□ -0.59
MRPS18B-208	ENST00000472267	UPP2	O95045	317 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms