RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PPFIBP1Q86W92 1011 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 CNGA4Q8IV77 575 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 GLYCTKQ8IVS8 523 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 ATAD1Q8NBU5 361 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 RIN2Q8WYP3 895 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-207ENST00000471342 MYLPFQ96A32 169 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 PIWIL1Q96J94 861 aaKnown RBP10.51□□□□□ -0.73
SF3A1-207ENST00000471342 FAM81BQ96LP2 452 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 PCMTD1Q96MG8 357 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-207ENST00000471342 KCNK16Q96T55 309 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 SLC4A5Q9BY07 1137 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 PACSIN1Q9BY11 444 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 LHX5Q9H2C1 402 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 MTIF3Q9H2K0 278 aaKnown RBP10.51□□□□□ -0.73
SF3A1-207ENST00000471342 NHEJ1Q9H9Q4 299 aaPredicted RBP10.51□□□□□ -0.73
SF3A1-207ENST00000471342 CERS4Q9HA82 394 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 FAM49BQ9NUQ9 324 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 ADAMTS1Q9UHI8 967 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 DSEQ9UL01 958 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 NCANO14594 1321 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 EYSQ5T1H1 3165 aa10.51□□□□□ -0.73
SF3A1-207ENST00000471342 FAM92AA1XBS5 289 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 OR6C75A6NL08 312 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 FANCGO15287 622 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ATF6P18850 670 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 PPM1AP35813 382 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 GABRB2P47870 512 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 GLUD2P49448 558 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ARID5AQ03989 594 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 UBE3AQ05086 875 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 GFPT1Q06210 699 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-207ENST00000471342 PDE4CQ08493 712 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ADCY1Q08828 1119 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ELAVL2Q12926 359 aaKnown RBP10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ASIC2Q16515 512 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 CLEC16AQ2KHT3 1053 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 CFAP221Q4G0U5 840 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 PTPN20Q4JDL3 420 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 MDH1BQ5I0G3 518 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 PPP1R15BQ5SWA1 713 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 TAF3Q5VWG9 929 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ANKS3Q6ZW76 656 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 MON1BQ7L1V2 547 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 CACNA2D4Q7Z3S7 1137 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 TMEM110Q86TL2 294 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 FAM35AQ86V20 835 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 CEP57Q86XR8 500 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 REXO1L1PQ8IX06 675 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 ANKRD52Q8NB46 1076 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 UBA3Q8TBC4 463 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 SLC2A14Q8TDB8 520 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 TIFAQ96CG3 184 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 SPAG5Q96R06 1193 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 CPXM1Q96SM3 734 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 LRRC3Q9BY71 257 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 IMPG2Q9BZV3 1241 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 LACRTQ9GZZ8 138 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
SF3A1-207ENST00000471342 SPTLC3Q9NUV7 552 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 NAGPAQ9UK23 515 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 TSPAN16Q9UKR8 245 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 MTUS1Q9ULD2 1270 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 KIAA1257Q9ULG3 409 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 PCDHB12Q9Y5F1 795 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 TRIOBPQ9H2D6 2365 aa10.5□□□□□ -0.73
SF3A1-207ENST00000471342 MYO7AQ13402 2215 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 XIRP2A4UGR9 3374 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 FAM170AA1A519 330 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 EIF3CLB5ME19 914 aaKnown RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 TGM5O43548 720 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 TRAPPC3O43617 180 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 SOAT2O75908 522 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 FYNP06241 537 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 KRT5P13647 590 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 P4HA1P13674 534 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 HMGA1P17096 107 aaKnown RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 POU3F3P20264 500 aaPredicted RBP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 MMP8P22894 467 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CYP2F1P24903 491 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 GNA15P30679 374 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 OR1D2P34982 312 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CLCN4P51793 760 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 GSDMDP57764 484 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CYP27A1Q02318 531 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CENPCQ03188 943 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 KLHL30Q0D2K2 578 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 RAB30Q15771 203 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 PSMD5Q16401 504 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 SLC18A3Q16572 532 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 CTXN3Q4LDR2 81 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 C2CD6Q53TS8 623 aa10.49□□□□□ -0.73
SF3A1-207ENST00000471342 PRPF38BQ5VTL8 546 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms