RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 SIM1P81133 766 aaPredicted RBP6.76□□□□□ -1.33
SSB-209ENST00000470621 MRPS35P82673 323 aaKnown RBP6.76□□□□□ -1.33
SSB-209ENST00000470621 FMO1Q01740 532 aa6.76□□□□□ -1.33
SSB-209ENST00000470621 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
SSB-209ENST00000470621 PEG10Q86TG7 708 aaKnown RBP6.76□□□□□ -1.33
SSB-209ENST00000470621 TRIM43Q96BQ3 446 aaPredicted RBP6.76□□□□□ -1.33
SSB-209ENST00000470621 MS4A7Q9GZW8 240 aaPredicted RBP6.76□□□□□ -1.33
SSB-209ENST00000470621 SYNPO2LQ9H987 977 aa6.76□□□□□ -1.33
SSB-209ENST00000470621 COL20A1Q9P218 1284 aa6.76□□□□□ -1.33
SSB-209ENST00000470621 LRIT1Q9P2V4 623 aa6.76□□□□□ -1.33
SSB-209ENST00000470621 DKK3Q9UBP4 350 aa6.76□□□□□ -1.33
SSB-209ENST00000470621 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.76□□□□□ -1.33
SSB-209ENST00000470621 ISM1B1AKI9 464 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 MPPED1O15442 326 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 MGEA5O60502 916 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 ELFN1P0C7U0 828 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 GNALP38405 381 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 ITIH3Q06033 890 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 RAB32Q13637 225 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 ZNF169Q14929 603 aaPredicted RBP6.75□□□□□ -1.33
SSB-209ENST00000470621 RGS7BPQ6MZT1 257 aaPredicted RBP6.75□□□□□ -1.33
SSB-209ENST00000470621 ZDHHC24Q6UX98 284 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 SUCLG2Q96I99 432 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 PDLIM2Q96JY6 352 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 PRDM13Q9H4Q3 707 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 CXorf36Q9H7Y0 433 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 KIAA1586Q9HCI6 787 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 AFF4Q9UHB7 1163 aaKnown RBP6.75□□□□□ -1.33
SSB-209ENST00000470621 OGDHLQ9ULD0 1010 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 NDRG4Q9ULP0 352 aaKnown RBP6.75□□□□□ -1.33
SSB-209ENST00000470621 KAT6AQ92794 2004 aa6.75□□□□□ -1.33
SSB-209ENST00000470621 F8W8V4 182 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 ZKSCAN1P17029 563 aaPredicted RBP6.74□□□□□ -1.33
SSB-209ENST00000470621 CXCR5P32302 372 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 CLK3P49761 638 aaKnown RBP6.74□□□□□ -1.33
SSB-209ENST00000470621 WNT3P56703 355 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 MYO1EQ12965 1108 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 PTPRRQ15256 657 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 HSP90AB2PQ58FF8 381 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 KAZNQ674X7 775 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 MAVSQ7Z434 540 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 NMD3Q96D46 503 aaKnown RBP6.74□□□□□ -1.33
SSB-209ENST00000470621 PGBD1Q96JS3 809 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 PTDSS2Q9BVG9 487 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 ZNF518BQ9C0D4 1074 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 ZNF287Q9HBT7 754 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 SHOC2Q9UQ13 582 aa6.74□□□□□ -1.33
SSB-209ENST00000470621 PYCARD-AS1I3L0S3 204 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 APAF1O14727 1248 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 KIF3BO15066 747 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 RHOBTB3O94955 611 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 LMNAP02545 664 aaKnown RBP6.73□□□□□ -1.33
SSB-209ENST00000470621 PPIFP30405 207 aaKnown RBP6.73□□□□□ -1.33
SSB-209ENST00000470621 PTH2RP49190 550 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 CLCN2P51788 898 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 NXPH1P58417 271 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 KRT17Q04695 432 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 PLA1AQ53H76 456 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 COBLL1Q53SF7 1204 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 ICE2Q659A1 982 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 GAS2L3Q86XJ1 694 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 ATG4AQ8WYN0 398 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 RFKQ969G6 155 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 TTC17Q96AE7 1141 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 FKBP10Q96AY3 582 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 MOGAT1Q96PD6 335 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 SARGQ9BW04 601 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 KLC4Q9NSK0 619 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 CORO2BQ9UQ03 480 aa6.73□□□□□ -1.33
SSB-209ENST00000470621 LINC00473A8K010 186 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 KIAA0355O15063 1070 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 PQBP1O60828 265 aaKnown RBP6.72□□□□□ -1.33
SSB-209ENST00000470621 CSF1RP07333 972 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 SLC5A1P13866 664 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 IL1R1P14778 569 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 PCSK6P29122 969 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 ADORA2AP29274 412 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 TBX4P57082 545 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 PRR16Q569H4 304 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 SIMC1Q8NDZ2 872 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 PBKQ96KB5 322 aa6.72□□□□□ -1.33
SSB-209ENST00000470621 MBD3L4A6NDZ8 208 aaPredicted RBP6.71□□□□□ -1.34
SSB-209ENST00000470621 MBD3L3A6NE82 208 aaPredicted RBP6.71□□□□□ -1.34
SSB-209ENST00000470621 CYP2C9P11712 490 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 TBCCQ15814 346 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 NBPF8Q3BBV2 869 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 SLC44A4Q53GD3 710 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 ZNF362Q5T0B9 420 aaPredicted RBP6.71□□□□□ -1.34
SSB-209ENST00000470621 SFRP4Q6FHJ7 346 aaPredicted RBP6.71□□□□□ -1.34
SSB-209ENST00000470621 KCTD20Q7Z5Y7 419 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 SPSB4Q96A44 273 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 NELL2Q99435 816 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 STK31Q9BXU1 1019 aa6.71□□□□□ -1.34
SSB-209ENST00000470621 A1CFQ9NQ94 594 aaKnown RBP6.71□□□□□ -1.34
SSB-209ENST00000470621 FER1L4A9Z1Z3 1794 aa6.7□□□□□ -1.34
SSB-209ENST00000470621 NR2F6P10588 404 aa6.7□□□□□ -1.34
SSB-209ENST00000470621 XRCC6P12956 609 aaKnown RBP eCLIP6.7□□□□□ -1.34
SSB-209ENST00000470621 TRIM27P14373 513 aa6.7□□□□□ -1.34
SSB-209ENST00000470621 KCNA3P22001 575 aa6.7□□□□□ -1.34
SSB-209ENST00000470621 KLRC1P26715 233 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms