RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 CYP27A1Q02318 531 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 DLX2Q07687 328 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-209ENST00000469852 DUSP4Q13115 394 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 ADAM15Q13444 863 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 PPP1R26Q5T8A7 1209 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-209ENST00000469852 E4F1Q66K89 784 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-209ENST00000469852 TPGS2Q68CL5 300 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 FAM35AQ86V20 835 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 PPFIBP1Q86W92 1011 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 FAM71AQ8IYT1 594 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 SLC2A14Q8TDB8 520 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 PPP2R3CQ969Q6 453 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 FAM81BQ96LP2 452 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 HEXIM2Q96MH2 286 aaKnown RBP15.72■□□□□ 0.11
COL9A3-209ENST00000469852 CYP4F11Q9HBI6 524 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 PCDHB5Q9Y5E4 795 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 BRWD1Q9NSI6 2320 aa15.72■□□□□ 0.11
COL9A3-209ENST00000469852 ITIH6Q6UXX5 1313 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 TBX10O75333 385 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 RFPL2O75678 378 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 GFPT2O94808 682 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 GYPCP04921 128 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 TPM3P06753 285 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 CFHP08603 1231 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 CD19P15391 556 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 BDNFP23560 247 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 ADORA2BP29275 332 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 LTBRP36941 435 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 COL19A1Q14993 1142 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 NFE2Q16621 373 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-209ENST00000469852 CTC1Q2NKJ3 1217 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 TJAP1Q5JTD0 557 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 SLC47A2Q86VL8 602 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 SPATA2LQ8IUW3 424 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-209ENST00000469852 TCEAL8Q8IYN2 117 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 C12orf76Q8N812 135 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-209ENST00000469852 STKLD1Q8NE28 680 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 SLC7A14Q8TBB6 771 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 CYFIP2Q96F07 1278 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 CLDND1Q9NY35 253 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 CLEC1BQ9P126 229 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 YIPF1Q9Y548 306 aa15.71■□□□□ 0.11
COL9A3-209ENST00000469852 MYH10P35580 1976 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 BEST1O76090 585 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 C8AP07357 584 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 PAEPP09466 180 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 HAPLN1P10915 354 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-209ENST00000469852 ATF6P18850 670 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 SOX5P35711 763 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 GOLGA8FQ08AF8 430 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 GOLGA8DPQ0D2H9 430 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 MAPRE1Q15691 268 aaKnown RBP15.7■□□□□ 0.1
COL9A3-209ENST00000469852 CFAP221Q4G0U5 840 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 FIGNQ5HY92 759 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 SDHAF4Q5VUM1 108 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 SPECC1LQ69YQ0 1117 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 TMEM184AQ6ZMB5 413 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 C4orf50Q6ZRC1 276 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 CACNA2D4Q7Z3S7 1137 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 TMC6Q7Z403 805 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 SPPL2BQ8TCT7 592 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 CPLX3Q8WVH0 158 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 MRFAP1L1Q96HT8 127 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 SPAG5Q96R06 1193 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 SEPT5Q99719 369 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-209ENST00000469852 HNRNPABQ99729 332 aaKnown RBP15.7■□□□□ 0.1
COL9A3-209ENST00000469852 MED10Q9BTT4 135 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 CDH22Q9UJ99 828 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 DAAM1Q9Y4D1 1078 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 INSL5Q9Y5Q6 135 aa15.7■□□□□ 0.1
COL9A3-209ENST00000469852 C2orf16Q68DN1 1984 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 PATJQ8NI35 1801 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 DOCK6Q96HP0 2047 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 GOLGA6L3A6NEY3 463 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 O00370 1275 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 PRRG1O14668 218 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 ZMYND10O75800 440 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 ADCY5O95622 1261 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 C1RP00736 705 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 VDRP11473 427 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 GNA15P30679 374 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 CASP14P31944 242 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 SMARCB1Q12824 385 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 DDR2Q16832 855 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 GOLGA7BQ2TAP0 167 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 MGAT5BQ3V5L5 792 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 SGO2Q562F6 1265 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 ARHGAP17Q68EM7 881 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 SYCE2Q6PIF2 218 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 EP400NLQ6ZTU2 488 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 TTC30AQ86WT1 665 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 GPR152Q8TDT2 470 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 C2orf15Q8WU43 125 aaKnown RBP15.69■□□□□ 0.1
COL9A3-209ENST00000469852 CASP10Q92851 521 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 PABPC5Q96DU9 382 aaKnown RBP15.69■□□□□ 0.1
COL9A3-209ENST00000469852 FUBP3Q96I24 572 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL9A3-209ENST00000469852 SMOQ99835 787 aa15.69■□□□□ 0.1
COL9A3-209ENST00000469852 APOL5Q9BWW9 433 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms