RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 MECRQ9BV79 373 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 CYTH4Q9UIA0 394 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 WNT10BO00744 389 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 CETN2P41208 172 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 KPNB1Q14974 876 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 FAXCQ5TGI0 409 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 DENND1BQ6P3S1 775 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 CCDC33Q8N5R6 958 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 DEPTORQ8TB45 409 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 ATP6V0A1Q93050 837 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 ZBTB10Q96DT7 871 aa12.69□□□□□ -0.38
VARS2-205ENST00000469358 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
VARS2-205ENST00000469358 CD19P15391 556 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 PSMA2P25787 234 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 EFHC2Q5JST6 749 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 SH3PXD2AQ5TCZ1 1133 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 SNRNP48Q6IEG0 339 aaKnown RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 RINLQ6ZS11 566 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 PALM2Q8IXS6 379 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 NRG4Q8WWG1 115 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 HSPH1Q92598 858 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 TTC25Q96NG3 672 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 GMLQ99445 158 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 PDGFDQ9GZP0 370 aaPredicted RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 MANSC1Q9H8J5 431 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 FAM237BA0A1B0GVD1 139 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 CDH8P55286 799 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 ZBTB16Q05516 673 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 RCN1Q15293 331 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 THEMIS2Q5TEJ8 643 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 CDHR3Q6ZTQ4 885 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 TDRPQ86YL5 185 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 SCYL3Q8IZE3 742 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 SYT15Q9BQS2 421 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 PIDD1Q9HB75 910 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 CISHQ9NSE2 258 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 MARCOQ9UEW3 520 aaPredicted RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 XPO7Q9UIA9 1087 aaKnown RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 MYH9P35579 1960 aaKnown RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 VWA5AO00534 786 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 WDR46O15213 610 aaKnown RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 MCCD1P59942 119 aaPredicted RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 CLDN10P78369 228 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 LMNB2Q03252 620 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 FAAP100Q0VG06 881 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 PRPF39Q86UA1 669 aaKnown RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 MCPH1Q8NEM0 835 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 SLC35B2Q8TB61 432 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 DCAKDQ8WVC6 231 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 CALN1Q9BXU9 219 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 ZFATQ9P243 1243 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 TRPC5Q9UL62 973 aaPredicted RBP12.68□□□□□ -0.38
VARS2-205ENST00000469358 POLIQ9UNA4 740 aa12.68□□□□□ -0.38
VARS2-205ENST00000469358 TCRBV5S1A1TA0A578 114 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
VARS2-205ENST00000469358 PSAPP07602 524 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 KITP10721 976 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 PYGBP11216 843 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 PTPN4P29074 926 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 ELK3P41970 407 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 TFAMQ00059 246 aaKnown RBP12.67□□□□□ -0.38
VARS2-205ENST00000469358 PTPN20Q4JDL3 420 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 ACSBG2Q5FVE4 666 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 FYB2Q5VWT5 728 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 C4orf50Q6ZRC1 276 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 MZB1Q8WU39 189 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 RSAD2Q8WXG1 361 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 TMEM120AQ9BXJ8 343 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 PCDH9Q9HC56 1237 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 PGAP2Q9UHJ9 254 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 COL4A5P29400 1685 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 C2CD2LO14523 706 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 LRCH4O75427 683 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 MARK3P27448 753 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 CCND2P30279 289 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 KBTBD12Q3ZCT8 623 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 CDCA2Q69YH5 1023 aaPredicted RBP12.67□□□□□ -0.38
VARS2-205ENST00000469358 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 CEP120Q8N960 986 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 BANPQ8N9N5 519 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 INPP5DQ92835 1189 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 KCNK13Q9HB14 408 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 NMRK1Q9NWW6 199 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 LRRC42Q9Y546 428 aa12.67□□□□□ -0.38
VARS2-205ENST00000469358 UGT1A9O60656 530 aa12.66□□□□□ -0.38
VARS2-205ENST00000469358 LPXNO60711 386 aa12.66□□□□□ -0.38
VARS2-205ENST00000469358 MUM1Q2TAK8 710 aa12.66□□□□□ -0.38
VARS2-205ENST00000469358 GNPTABQ3T906 1256 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms