RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TACC1O75410 805 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 AKAP3O75969 853 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 ATICP31939 592 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 TUFMP49411 452 aaKnown RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 NFE2Q16621 373 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 INTS6LQ5JSJ4 861 aaKnown RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 ZNF658Q5TYW1 1059 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 TMEM164Q5U3C3 297 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 FAM171BQ6P995 826 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 PARM1Q6UWI2 310 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 DCP1BQ8IZD4 617 aaKnown RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 DEPDC4Q8N2C3 294 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 FGF14Q92915 247 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 PSMG2Q969U7 264 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 TCEAL4Q96EI5 215 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 CORO1BQ9BR76 489 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 GTPBP4Q9BZE4 634 aaKnown RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 ABCB6Q9NP58 842 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 RMND1Q9NWS8 449 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 DDX43Q9NXZ2 648 aaKnown RBP11.95□□□□□ -0.5
COL4A6-205ENST00000468338 MUC6Q6W4X9 2439 aa11.95□□□□□ -0.5
COL4A6-205ENST00000468338 SMC2O95347 1197 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 HAPLN1P10915 354 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ATF6P18850 670 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 WARSP23381 471 aaKnown RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 NR2F2P24468 414 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 LMO2P25791 158 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 RPL13P26373 211 aaKnown RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 PCSK1P29120 753 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 PRCPP42785 496 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ALDH1A3P47895 512 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 MMP16P51512 607 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 EPHB3P54753 998 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 MYL6P60660 151 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 DLG4P78352 724 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 MYL7Q01449 175 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 TSPY1Q01534 308 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ZACNQ401N2 412 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 CFAP221Q4G0U5 840 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 CYP4A22Q5TCH4 519 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 TDRD10Q5VZ19 366 aaKnown RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 MTSS1LQ765P7 747 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 DNAJB7Q7Z6W7 309 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ZC3H3Q8IXZ2 948 aaKnown RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 SMYD4Q8IYR2 804 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ELMOD1Q8N336 334 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 FBXL6Q8N531 539 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 FAM174AQ8TBP5 190 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 MKNK1Q9BUB5 465 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 SLC2A4RGQ9NR83 387 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 WNT16Q9UBV4 365 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 ZMIZ1Q9ULJ6 1067 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 FRMD4BQ9Y2L6 1034 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
COL4A6-205ENST00000468338 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 PCDHB5Q9Y5E4 795 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 NUMBLQ9Y6R0 609 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 F5P12259 2224 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 PTPRDP23468 1912 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 DENND4CQ5VZ89 1909 aa11.94□□□□□ -0.5
COL4A6-205ENST00000468338 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 MYBPHLA2RUH7 354 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 HCRTO43612 131 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 NARSO43776 548 aaKnown RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 SOAT2O75908 522 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 VNN1O95497 513 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 SRFP11831 508 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 CEBPBP17676 345 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 ACAT1P24752 427 aaKnown RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 ADAM9Q13443 819 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 WDR72Q3MJ13 1102 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 CEP135Q66GS9 1140 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 INTS8Q75QN2 995 aaKnown RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 GAREM2Q75VX8 874 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 PDZD4Q76G19 769 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 SV2AQ7L0J3 742 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 ADSSL1Q8N142 457 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 SHKBP1Q8TBC3 707 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 FAM200AQ8TCP9 573 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 STK32AQ8WU08 396 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 SMARCE1Q969G3 411 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 SYAP1Q96A49 352 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 FUBP3Q96I24 572 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 ARHGAP9Q9BRR9 750 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 CRTAC1Q9NQ79 661 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 ASAH2Q9NR71 780 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 HOOK1Q9UJC3 728 aaKnown RBP11.93□□□□□ -0.5
COL4A6-205ENST00000468338 GTF3C4Q9UKN8 822 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 CDH9Q9ULB4 789 aa11.93□□□□□ -0.5
COL4A6-205ENST00000468338 KINO60870 393 aaKnown RBP11.92□□□□□ -0.5
COL4A6-205ENST00000468338 ECI2O75521 394 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms