RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 ARHGEF19Q8IW93 802 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 FUKQ8N0W3 1084 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 AOPEPQ8N6M6 819 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 PSMG2Q969U7 264 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 NT5C1BQ96P26 610 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 UHRF1Q96T88 793 aaPredicted RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 SEPT5Q99719 369 aaPredicted RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 LPIN3Q9BQK8 851 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 ZNF518BQ9C0D4 1074 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 ELOVL4Q9GZR5 314 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 NAT10Q9H0A0 1025 aaKnown RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 NDST4Q9H3R1 872 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 FANCLQ9NW38 375 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.53
MSH5-212ENST00000467319 ASB3Q9Y575 518 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 TRIOO75962 3097 aa11.77□□□□□ -0.53
MSH5-212ENST00000467319 OBSL1O75147 1896 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 GREB1Q4ZG55 1949 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 NOL4O94818 638 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 RHOP08100 348 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 CD58P19256 250 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 CYP2F1P24903 491 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 CCR2P41597 374 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 GPR15P49685 360 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 ZNF132P52740 706 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 CACNA2D1P54289 1103 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 RAD23BP54727 409 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 ORC1Q13415 861 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 IQCB1Q15051 598 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 KRT31Q15323 416 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
MSH5-212ENST00000467319 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 PAQR9Q6ZVX9 377 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 TDRD5Q8NAT2 981 aaKnown RBP11.76□□□□□ -0.53
MSH5-212ENST00000467319 LEMD2Q8NC56 503 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 EHBP1Q8NDI1 1231 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 KAT5Q92993 513 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 CEP295NLQ96MC4 621 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 MYADMQ96S97 322 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 NT5C1AQ9BXI3 368 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 B3GNT5Q9BYG0 378 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 PIDD1Q9HB75 910 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 ZNF334Q9HCZ1 680 aaPredicted RBP11.76□□□□□ -0.53
MSH5-212ENST00000467319 SIX2Q9NPC8 291 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 CD320Q9NPF0 282 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 EPS15L1Q9UBC2 864 aa11.76□□□□□ -0.53
MSH5-212ENST00000467319 LIMA1Q9UHB6 759 aaKnown RBP11.76□□□□□ -0.53
MSH5-212ENST00000467319 MOSPD3O75425 235 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 MICAL2O94851 1124 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 CCDC130P13994 396 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
MSH5-212ENST00000467319 HMGA1P17096 107 aaKnown RBP11.75□□□□□ -0.53
MSH5-212ENST00000467319 BDNFP23560 247 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 FSHRP23945 695 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 PON1P27169 355 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 ZNF165P49910 485 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 EPHB3P54753 998 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 RPL10AP62906 217 aaKnown RBP11.75□□□□□ -0.53
MSH5-212ENST00000467319 CYP27A1Q02318 531 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 LRMPQ12912 555 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 EXOC3L4Q17RC7 722 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 SMYD5Q6GMV2 418 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 GET4Q7L5D6 327 aaPredicted RBP11.75□□□□□ -0.53
MSH5-212ENST00000467319 OTOP3Q7RTS5 596 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 ITIH5Q86UX2 942 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 NPAS3Q8IXF0 933 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 ELMOD1Q8N336 334 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 PPM1KQ8N3J5 372 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 SLC4A11Q8NBS3 891 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 ITFG1Q8TB96 612 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 JAKMIP2Q96AA8 810 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 TRMT2BQ96GJ1 504 aaKnown RBP11.75□□□□□ -0.53
MSH5-212ENST00000467319 SPATA17Q96L03 361 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 C8orf48Q96LL4 319 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 CORO1BQ9BR76 489 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 CRACR2AQ9BSW2 395 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
MSH5-212ENST00000467319 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 ASAH2Q9NR71 780 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 KRT82Q9NSB4 513 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 CNTN6Q9UQ52 1028 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 NR2E1Q9Y466 385 aa11.75□□□□□ -0.53
MSH5-212ENST00000467319 LRRC10BA6NIK2 292 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 LGALS16A8MUM7 142 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 F8VP50 259 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 CLDN5O00501 218 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 TADA3O75528 432 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 CEBPBP17676 345 aa11.74□□□□□ -0.53
MSH5-212ENST00000467319 PTPN2P17706 415 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms