RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CCDC181Q5TID7 509 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 MFSD6Q6ZSS7 791 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 APBB1IPQ7Z5R6 666 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 CABP7Q86V35 215 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 IQCA1Q86XH1 822 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 CMASQ8NFW8 434 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 SLC22A17Q8WUG5 538 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 CYB5D2Q8WUJ1 264 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 SEPT1Q8WYJ6 367 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 RIN2Q8WYP3 895 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 ESR2Q92731 530 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 NELL1Q92832 810 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 MTMR8Q96EF0 704 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 SIGLEC10Q96LC7 697 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 Q96M66 194 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 SEC62Q99442 399 aaKnown RBP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 ADAM2Q99965 735 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 UBA5Q9GZZ9 404 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 TMX1Q9H3N1 280 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 ARHGEF3Q9NR81 526 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 ZBTB40Q9NUA8 1239 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 GPATCH2Q9NW75 528 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 EPS15L1Q9UBC2 864 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 ZMYM5Q9UJ78 669 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 CDH22Q9UJ99 828 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTCD3-207ENST00000467273 PATJQ8NI35 1801 aa6.17□□□□□ -1.42
PTCD3-207ENST00000467273 DOCK5Q9H7D0 1870 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ZBTB5O15062 677 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 DHX16O60231 1041 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 SUSD5O60279 629 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 RPS6KA5O75582 802 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 CXCL14O95715 111 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 C1RP00736 705 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 TP53P04637 393 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 PROS1P07225 676 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 DCNP07585 359 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 PARP1P09874 1014 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 CTSAP10619 480 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ALDH7A1P49419 539 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 SLC26A2P50443 739 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 NR0B2Q15466 257 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 RSPO2Q6UXX9 243 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 MAML2Q8IZL2 1156 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 SLC39A11Q8N1S5 342 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 SLC44A3Q8N4M1 653 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ST13P5Q8NFI4 369 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 TMEM169Q96HH4 297 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 DHRS1Q96LJ7 313 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 CASD1Q96PB1 797 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 MRPL9Q9BYD2 267 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ZBP1Q9H171 429 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 BCAS3Q9H6U6 928 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 KAT14Q9H8E8 782 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ZSCAN32Q9NX65 697 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 SUCOQ9UBS9 1254 aaKnown RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 GMEB2Q9UKD1 530 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 USP18Q9UMW8 372 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ZFP37Q9Y6Q3 630 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-207ENST00000467273 MIA3Q5JRA6 1907 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 ZFYVE26Q68DK2 2539 aa6.16□□□□□ -1.42
PTCD3-207ENST00000467273 CACNA1IQ9P0X4 2223 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 KANSL1LA0AUZ9 987 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 ESYT3A0FGR9 886 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 OR14I1A6ND48 311 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 MGEA5O60502 916 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 CLEC3AO75596 197 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 FGAP02671 866 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 WEE2P0C1S8 567 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 INSRRP14616 1297 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 PMLP29590 882 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 HOXA13P31271 388 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 CRYBB1P53674 252 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 SSRP1Q08945 709 aaKnown RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 PTPN14Q15678 1187 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 ZXDCQ2QGD7 858 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 SLC10A6Q3KNW5 377 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 SPECC1Q5M775 1068 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 LAIR1Q6GTX8 287 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 DCLRE1AQ6PJP8 1040 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 PLPPR4Q7Z2D5 763 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 DDX53Q86TM3 631 aaKnown RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 C12orf76Q8N812 135 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 SYT8Q8NBV8 401 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 NELL2Q99435 816 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 IER2Q9BTL4 223 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 DDX23Q9BUQ8 820 aaKnown RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 FAM49AQ9H0Q0 323 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 CPVLQ9H3G5 476 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 METTL14Q9HCE5 456 aaKnown RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 WDR6Q9NNW5 1121 aaKnown RBP6.15□□□□□ -1.42
PTCD3-207ENST00000467273 HELLSQ9NRZ9 838 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 FANCLQ9NW38 375 aa6.15□□□□□ -1.42
PTCD3-207ENST00000467273 RAB23Q9ULC3 237 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms