RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 RAD23BP54727 409 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 UBXN1Q04323 297 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 PLD1Q13393 1074 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 PUS10Q3MIT2 529 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 ATAT1Q5SQI0 421 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 DPY19L2P1Q6NXN4 242 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 ATXN2LQ8WWM7 1075 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 JAKMIP2Q96AA8 810 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 MED10Q9BTT4 135 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 LSM14BQ9BX40 385 aaKnown RBP15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 B3GNT5Q9BYG0 378 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 RHOBTB2Q9BYZ6 727 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 PIDD1Q9HB75 910 aa15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 USP15Q9Y4E8 981 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-208ENST00000466601 CLDN5O00501 218 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 POU2F2P09086 479 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 BDNFP23560 247 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 MTHFRP42898 656 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 MAGEA11P43364 429 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 EPHB3P54753 998 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 FANCCQ00597 558 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 ARHGAP44Q17R89 818 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 KLHDC7AQ5VTJ3 777 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 PTCRAQ6ISU1 281 aaPredicted RBP15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 TMEM270Q6UE05 265 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 VSTM1Q6UX27 236 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 C12orf29Q8N999 325 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 SLC4A11Q8NBS3 891 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 RNF214Q8ND24 703 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 SUSD6Q92537 303 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 RIPOR3Q96MK2 946 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 PLCB1Q9NQ66 1216 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 RTN4Q9NQC3 1192 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 FAM49BQ9NUQ9 324 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 CDH22Q9UJ99 828 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 DNAJC12Q9UKB3 198 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 EYSQ5T1H1 3165 aa15.37■□□□□ 0.05
DNMT3A-208ENST00000466601 A0A1B0GTH6 734 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 RNF225M0QZC1 329 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 TEX33O43247 280 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 CCDC130P13994 396 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 ATF6P18850 670 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 GPR15P49685 360 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 KLK7P49862 253 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 KCNQ1P51787 676 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 RPL10AP62906 217 aaKnown RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 SYCP1Q15431 976 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 DDR2Q16832 855 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 PAQR9Q6ZVX9 377 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 FAM35AQ86V20 835 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 SCN4BQ8IWT1 228 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 FUKQ8N0W3 1084 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 ELMOD1Q8N336 334 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 SLC2A14Q8TDB8 520 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 CYFIP2Q96F07 1278 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 ZNF512Q96ME7 567 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 PCMTD1Q96MG8 357 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 NAP1L5Q96NT1 182 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 NECTIN4Q96NY8 510 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 ERGIC2Q96RQ1 377 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 HNRNPABQ99729 332 aaKnown RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 ZNF518BQ9C0D4 1074 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 CEP72Q9P209 647 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 AJAP1Q9UKB5 411 aaPredicted RBP15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 CNTN6Q9UQ52 1028 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 FAM50BQ9Y247 325 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 SIK3Q9Y2K2 1263 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 ATP8B3O60423 1300 aa15.36■□□□□ 0.05
DNMT3A-208ENST00000466601 BRWD1Q9NSI6 2320 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 PAEPP09466 180 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 KRT5P13647 590 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 UCHL3P15374 230 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 PTPN2P17706 415 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 GRIK1P39086 918 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 CBX2Q14781 532 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 VEPH1Q14D04 833 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 SMAD2Q15796 467 aaKnown RBP15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 GRASPQ7Z6J2 395 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 RBBP8NLQ8NC74 664 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 GIPC2Q8TF65 315 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 ASB2Q96Q27 587 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 GANQ9H2C0 597 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 FAM207AQ9NSI2 230 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 DNMT3BQ9UBC3 853 aaKnown RBP15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 KIAA1257Q9ULG3 409 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 ASB3Q9Y575 518 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 FHOD1Q9Y613 1164 aa15.35■□□□□ 0.05
DNMT3A-208ENST00000466601 COL6A3P12111 3177 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 TRIM66O15016 1216 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 AP1G2O75843 785 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 VDRP11473 427 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 IL9P15248 144 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 CD19P15391 556 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 RFX1P22670 979 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 ADORA2BP29275 332 aa15.34■□□□□ 0.05
DNMT3A-208ENST00000466601 USP8P40818 1118 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms