RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 ELOVL4Q9GZR5 314 aa8.23□□□□□ -1.09
THBS3-205ENST00000465596 RAB20Q9NX57 234 aa8.23□□□□□ -1.09
THBS3-205ENST00000465596 ABI2Q9NYB9 513 aaPredicted RBP8.23□□□□□ -1.09
THBS3-205ENST00000465596 NXF1Q9UBU9 619 aaKnown RBP8.23□□□□□ -1.09
THBS3-205ENST00000465596 CDH7Q9ULB5 785 aa8.23□□□□□ -1.09
THBS3-205ENST00000465596 NR2E1Q9Y466 385 aa8.23□□□□□ -1.09
THBS3-205ENST00000465596 PCDHB5Q9Y5E4 795 aa8.23□□□□□ -1.09
THBS3-205ENST00000465596 NYNRINQ9P2P1 1898 aaKnown RBP8.23□□□□□ -1.09
THBS3-205ENST00000465596 DMXL1Q9Y485 3027 aa8.23□□□□□ -1.09
THBS3-205ENST00000465596 MYO18AQ92614 2054 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 ZNF292O60281 2723 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 SHISA7A6NL88 538 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 HHLA1C9JL84 531 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 CLDN5O00501 218 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 TNFRSF10BO14763 440 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 PHACTR2O75167 634 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 MBD3O95983 291 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 LRG1P02750 347 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 F11P03951 625 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 PDGFRBP09619 1106 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 PTPN2P17706 415 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 PTPN1P18031 435 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 ACO1P21399 889 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 GNL1P36915 607 aaPredicted RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 ZNF132P52740 706 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 NDST1P52848 882 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 USP46P62068 366 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 TNNC1P63316 161 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 ORC1Q13415 861 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 TRPC3Q13507 836 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 MTMR3Q13615 1198 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 NCAPHQ15003 741 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 DCAF17Q5H9S7 520 aaPredicted RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 MDH1BQ5I0G3 518 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 STXBP5Q5T5C0 1151 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 SDHAF4Q5VUM1 108 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 GET4Q7L5D6 327 aaPredicted RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 OTOP3Q7RTS5 596 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 APTXQ7Z2E3 356 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 DNAJB7Q7Z6W7 309 aaPredicted RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 UNC93AQ86WB7 457 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 DCP1BQ8IZD4 617 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 C12orf29Q8N999 325 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 SLC4A11Q8NBS3 891 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 ZMIZ2Q8NF64 920 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 RIN3Q8TB24 985 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 GPR152Q8TDT2 470 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 RSAD2Q8WXG1 361 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 KAT5Q92993 513 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 SPATA17Q96L03 361 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 KREMEN1Q96MU8 473 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 MMS19Q96T76 1030 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 CORO1BQ9BR76 489 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 RPP25Q9BUL9 199 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 FAM124BQ9H5Z6 455 aaPredicted RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 MMRN2Q9H8L6 949 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 CYP3A43Q9HB55 503 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 TRPV4Q9HBA0 871 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 METTL14Q9HCE5 456 aaKnown RBP8.22□□□□□ -1.09
THBS3-205ENST00000465596 CSNK1G1Q9HCP0 422 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 SIX2Q9NPC8 291 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.22□□□□□ -1.09
THBS3-205ENST00000465596 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.22□□□□□ -1.09
THBS3-205ENST00000465596 IL37Q9NZH6 218 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 ASB3Q9Y575 518 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 CFAP54Q96N23 3096 aa8.22□□□□□ -1.09
THBS3-205ENST00000465596 FAM92AA1XBS5 289 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 P4HA2O15460 535 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 DCXO43602 365 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 NARSO43776 548 aaKnown RBP8.21□□□□□ -1.1
THBS3-205ENST00000465596 STX10O60499 249 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 BEST1O76090 585 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 CCDC130P13994 396 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 GJA1P17302 382 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 BDNFP23560 247 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 ELF1P32519 619 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 SSTR3P32745 418 aaPredicted RBP8.21□□□□□ -1.1
THBS3-205ENST00000465596 TUFMP49411 452 aaKnown RBP8.21□□□□□ -1.1
THBS3-205ENST00000465596 RAD23BP54727 409 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 ZXDAP98168 799 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 APBA1Q02410 837 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 PLD1Q13393 1074 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 CUL2Q13617 745 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 DDR2Q16832 855 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 CT47A1Q5JQC4 288 aaPredicted RBP8.21□□□□□ -1.1
THBS3-205ENST00000465596 CCDC183Q5T5S1 534 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 IER5LQ5T953 404 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 PARM1Q6UWI2 310 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 VSTM1Q6UX27 236 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 ACOT1Q86TX2 421 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 FAM35AQ86V20 835 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 ARHGEF19Q8IW93 802 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 LEMD2Q8NC56 503 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 ING5Q8WYH8 240 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 EDAQ92838 391 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 C8orf48Q96LL4 319 aa8.21□□□□□ -1.1
THBS3-205ENST00000465596 CEP295NLQ96MC4 621 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms