RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 LMO2P25791 158 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 ASIC1P78348 528 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 MYO1EQ12965 1108 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 RUNX3Q13761 415 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 CCINQ13939 588 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 TRIM68Q6AZZ1 485 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 FAM171BQ6P995 826 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 EPM2AIP1Q7L775 607 aaPredicted RBP22.37■■□□□ 1.17
CSPG5-204ENST00000465441 LIMS2Q7Z4I7 341 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 SPATA2LQ8IUW3 424 aaPredicted RBP22.37■■□□□ 1.17
CSPG5-204ENST00000465441 GPR161Q8N6U8 529 aaKnown RBP22.37■■□□□ 1.17
CSPG5-204ENST00000465441 HPDLQ96IR7 371 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 KIAA1586Q9HCI6 787 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 HPS4Q9NQG7 708 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 C2orf42Q9NWW7 574 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 DLL3Q9NYJ7 618 aa22.37■■□□□ 1.17
CSPG5-204ENST00000465441 DENND4CQ5VZ89 1909 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 CHURC1-FNTBB4DL54 471 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 K7ESF4 209 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 EIF3DO15371 548 aaKnown RBP eCLIP22.36■■□□□ 1.17
CSPG5-204ENST00000465441 HRO43593 1189 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 TADA3O75528 432 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 CST3P01034 146 aaPredicted RBP22.36■■□□□ 1.17
CSPG5-204ENST00000465441 TGM1P22735 817 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 PCSK1P29120 753 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 FNTBP49356 437 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 LPAL2Q16609 132 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 RSPO4Q2I0M5 234 aaPredicted RBP22.36■■□□□ 1.17
CSPG5-204ENST00000465441 CFAP221Q4G0U5 840 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 CNNM4Q6P4Q7 775 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 DGLUCYQ7Z3D6 616 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 SCN4BQ8IWT1 228 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 SYNPOQ8N3V7 929 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 RIN3Q8TB24 985 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 SNX21Q969T3 373 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 MYRFLQ96LU7 910 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 EBF3Q9H4W6 596 aa22.36■■□□□ 1.17
CSPG5-204ENST00000465441 UXTQ9UBK9 157 aaPredicted RBP22.36■■□□□ 1.17
CSPG5-204ENST00000465441 OTOL1A6NHN0 477 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 CLIC2O15247 247 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 PAPSS2O95340 614 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 HOXC13P31276 330 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 FOXD4L6Q3SYB3 417 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 FAM26FQ5R3K3 315 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 FOXD4L3Q6VB84 417 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 TRAPPC11Q7Z392 1133 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 KBTBD7Q8WVZ9 684 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 TRMT2BQ96GJ1 504 aaKnown RBP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 FUBP3Q96I24 572 aaKnown RBP eCLIP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 CYP2S1Q96SQ9 504 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 KIF9Q9HAQ2 790 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 MAGEC2Q9UBF1 373 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-204ENST00000465441 RAB23Q9ULC3 237 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 ZNF292O60281 2723 aa22.35■■□□□ 1.17
CSPG5-204ENST00000465441 KIF26AQ9ULI4 1882 aaPredicted RBP22.34■■□□□ 1.17
CSPG5-204ENST00000465441 POLR2DO15514 142 aaKnown RBP22.34■■□□□ 1.17
CSPG5-204ENST00000465441 PDGFRBP09619 1106 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 CASP1P29466 404 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 ZNF268Q14587 947 aaPredicted RBP22.34■■□□□ 1.17
CSPG5-204ENST00000465441 PRR23BQ6ZRT6 265 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 UNC13DQ70J99 1090 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 WDR49Q8IV35 697 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 SYT15Q9BQS2 421 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 AGPAT3Q9NRZ7 376 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 GMEB2Q9UKD1 530 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 CDH9Q9ULB4 789 aa22.34■■□□□ 1.17
CSPG5-204ENST00000465441 ZNF638Q14966 1978 aaKnown RBP22.33■■□□□ 1.17
CSPG5-204ENST00000465441 ARSAP15289 507 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 PSMC1P62191 440 aaKnown RBP22.33■■□□□ 1.17
CSPG5-204ENST00000465441 EHHADHQ08426 723 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 SRSF5Q13243 272 aaKnown RBP22.33■■□□□ 1.17
CSPG5-204ENST00000465441 SIM2Q14190 667 aaPredicted RBP22.33■■□□□ 1.17
CSPG5-204ENST00000465441 HEATR6Q6AI08 1181 aaKnown RBP22.33■■□□□ 1.17
CSPG5-204ENST00000465441 C4orf50Q6ZRC1 276 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 LONP2Q86WA8 852 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 NELFCDQ8IXH7 590 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 SCFD1Q8WVM8 642 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 CHFRQ96EP1 664 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 SLC22A12Q96S37 553 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 MMS19Q96T76 1030 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 BLZF1Q9H2G9 400 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 TRPC7Q9HCX4 862 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 PARD6AQ9NPB6 346 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 CRTAC1Q9NQ79 661 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 PCDHA7Q9UN72 937 aa22.33■■□□□ 1.17
CSPG5-204ENST00000465441 TRDMT1O14717 391 aaKnown RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 ZSCAN22P10073 491 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 DLATP10515 647 aaKnown RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 TNNI1P19237 187 aa22.32■■□□□ 1.16
CSPG5-204ENST00000465441 WARSP23381 471 aaKnown RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 MAGEA11P43364 429 aa22.32■■□□□ 1.16
CSPG5-204ENST00000465441 FAM160A1Q05DH4 1040 aa22.32■■□□□ 1.16
CSPG5-204ENST00000465441 SNRNP35Q16560 246 aaKnown RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 TMEM196Q5HYL7 178 aa22.32■■□□□ 1.16
CSPG5-204ENST00000465441 FSTL4Q6MZW2 842 aa22.32■■□□□ 1.16
CSPG5-204ENST00000465441 CC2D1AQ6P1N0 951 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 FBRSL1Q9HCM7 1045 aaKnown RBP22.32■■□□□ 1.16
CSPG5-204ENST00000465441 USP18Q9UMW8 372 aa22.32■■□□□ 1.16
CSPG5-204ENST00000465441 MED19A0JLT2 244 aaPredicted RBP22.31■■□□□ 1.16
CSPG5-204ENST00000465441 USP17L7P0C7H9 530 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms