RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 RFX1P22670 979 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 CBX2Q14781 532 aaPredicted RBP18.03■□□□□ 0.48
USP39-211ENST00000465282 FILIP1LQ4L180 1135 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 MDH1BQ5I0G3 518 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 IQCEQ6IPM2 695 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 ACOT1Q86TX2 421 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 ITIH5Q86UX2 942 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 LEMD2Q8NC56 503 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 WHAMMQ8TF30 809 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 MYLPFQ96A32 169 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 TMEM176AQ96HP8 235 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 ZNF512Q96ME7 567 aaPredicted RBP18.03■□□□□ 0.48
USP39-211ENST00000465282 ARID3AQ99856 593 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 ANP32EQ9BTT0 268 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 CRISPLD1Q9H336 500 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 DPEP3Q9H4B8 488 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 UBE2TQ9NPD8 197 aaPredicted RBP18.03■□□□□ 0.48
USP39-211ENST00000465282 AVENQ9NQS1 362 aaPredicted RBP18.03■□□□□ 0.48
USP39-211ENST00000465282 PRKAG3Q9UGI9 489 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 SLC27A5Q9Y2P5 690 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 DAAM1Q9Y4D1 1078 aa18.03■□□□□ 0.48
USP39-211ENST00000465282 CCL16O15467 120 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 PTPN2P17706 415 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 CYP27A1Q02318 531 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 TWF1Q12792 350 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 VEPH1Q14D04 833 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 APTXQ7Z2E3 356 aaKnown RBP18.02■□□□□ 0.48
USP39-211ENST00000465282 LUZP1Q86V48 1076 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 ARHGEF19Q8IW93 802 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 UBR7Q8N806 425 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 SEPT5Q99719 369 aaPredicted RBP18.02■□□□□ 0.48
USP39-211ENST00000465282 APOL5Q9BWW9 433 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 WDR6Q9NNW5 1121 aaKnown RBP18.02■□□□□ 0.48
USP39-211ENST00000465282 PLCB1Q9NQ66 1216 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 CNTN6Q9UQ52 1028 aa18.02■□□□□ 0.48
USP39-211ENST00000465282 GREB1Q4ZG55 1949 aa18.02■□□□□ 0.47
USP39-211ENST00000465282 DOCK6Q96HP0 2047 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 TRIM66O15016 1216 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 PAEPP09466 180 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 ATP1A3P13637 1013 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
USP39-211ENST00000465282 CYP2F1P24903 491 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 RAD23BP54727 409 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 KCNMA1Q12791 1236 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 RRAGAQ7L523 313 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 PSMG2Q969U7 264 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 SMARCD1Q96GM5 515 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 SPATA17Q96L03 361 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 HNRNPABQ99729 332 aaKnown RBP18.01■□□□□ 0.47
USP39-211ENST00000465282 B3GNT5Q9BYG0 378 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 EHD2Q9NZN4 543 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 HMGXB4Q9UGU5 601 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 NOTCH4Q99466 2003 aa18.01■□□□□ 0.47
USP39-211ENST00000465282 ZNF197O14709 1029 aa18■□□□□ 0.47
USP39-211ENST00000465282 FGF19O95750 216 aa18■□□□□ 0.47
USP39-211ENST00000465282 BMP1P13497 986 aa18■□□□□ 0.47
USP39-211ENST00000465282 BDNFP23560 247 aa18■□□□□ 0.47
USP39-211ENST00000465282 EPHA5P54756 1037 aa18■□□□□ 0.47
USP39-211ENST00000465282 UBXN1Q04323 297 aa18■□□□□ 0.47
USP39-211ENST00000465282 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
USP39-211ENST00000465282 TMEM270Q6UE05 265 aa18■□□□□ 0.47
USP39-211ENST00000465282 FUKQ8N0W3 1084 aa18■□□□□ 0.47
USP39-211ENST00000465282 TTC9BQ8N6N2 239 aa18■□□□□ 0.47
USP39-211ENST00000465282 SLC4A11Q8NBS3 891 aa18■□□□□ 0.47
USP39-211ENST00000465282 CYFIP2Q96F07 1278 aa18■□□□□ 0.47
USP39-211ENST00000465282 C8orf48Q96LL4 319 aa18■□□□□ 0.47
USP39-211ENST00000465282 HEXIM2Q96MH2 286 aaKnown RBP18■□□□□ 0.47
USP39-211ENST00000465282 KREMEN1Q96MU8 473 aa18■□□□□ 0.47
USP39-211ENST00000465282 ERGIC2Q96RQ1 377 aa18■□□□□ 0.47
USP39-211ENST00000465282 TWNKQ96RR1 684 aa18■□□□□ 0.47
USP39-211ENST00000465282 PHF7Q9BWX1 381 aaPredicted RBP18■□□□□ 0.47
USP39-211ENST00000465282 SIX2Q9NPC8 291 aa18■□□□□ 0.47
USP39-211ENST00000465282 CEP72Q9P209 647 aa18■□□□□ 0.47
USP39-211ENST00000465282 USTQ9Y2C2 406 aa18■□□□□ 0.47
USP39-211ENST00000465282 PCDHB4Q9Y5E5 795 aa18■□□□□ 0.47
USP39-211ENST00000465282 MICAL2O94851 1124 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 SERPINC1P01008 464 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 CSH1P0DML2 217 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 CSH2P0DML3 217 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 VDRP11473 427 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 ATF6P18850 670 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 ANXA13P27216 316 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 GRIK1P39086 918 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 KCNQ1P51787 676 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 STILQ15468 1287 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 PABPC1LQ4VXU2 614 aaKnown RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 ZNF394Q53GI3 561 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 CYP4A22Q5TCH4 519 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 KLHDC7AQ5VTJ3 777 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 ARHGAP17Q68EM7 881 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 DPY19L2P1Q6NXN4 242 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 GRASPQ7Z6J2 395 aaPredicted RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 DNAJB7Q7Z6W7 309 aaPredicted RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 C12orf29Q8N999 325 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 MED10Q9BTT4 135 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.99■□□□□ 0.47
USP39-211ENST00000465282 DNMT3BQ9UBC3 853 aaKnown RBP17.99■□□□□ 0.47
USP39-211ENST00000465282 NR2E1Q9Y466 385 aa17.99■□□□□ 0.47
USP39-211ENST00000465282 ZFP37Q9Y6Q3 630 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms