RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 C11orf74Q86VG3 221 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 EFCAB13Q8IY85 973 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 LEO1Q8WVC0 666 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-220ENST00000464800 OSCP1Q8WVF1 389 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 TRMT2BQ96GJ1 504 aaKnown RBP15.73■□□□□ 0.11
MCF2L-220ENST00000464800 TMEM206Q9H813 350 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 ABCB6Q9NP58 842 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 TMLHEQ9NVH6 421 aa15.73■□□□□ 0.11
MCF2L-220ENST00000464800 TRAV19A0A0A6YYK7 116 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 C1QTNF9BB2RNN3 333 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 NOL4O94818 638 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 IL18RAPO95256 599 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 CKMP06732 381 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 USP17L7P0C7H9 530 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 C1QTNF9P0C862 333 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 UBA7P41226 1012 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 PNPLA4P41247 253 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 DGKEP52429 567 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 RPL10AP62906 217 aaKnown RBP15.72■□□□□ 0.11
MCF2L-220ENST00000464800 POU5F1Q01860 360 aaKnown RBP15.72■□□□□ 0.11
MCF2L-220ENST00000464800 USP4Q13107 963 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 TSTD1Q8NFU3 115 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 RASSF8Q8NHQ8 419 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 CCDC26Q8TAB7 109 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 LRRC15Q8TF66 581 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 EZH1Q92800 747 aaPredicted RBP15.72■□□□□ 0.11
MCF2L-220ENST00000464800 FIZ1Q96SL8 496 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 STYXL1Q9Y6J8 313 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 FRYQ5TBA9 3013 aa15.72■□□□□ 0.11
MCF2L-220ENST00000464800 CACNA1GO43497 2377 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 PTPRDP23468 1912 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 GIPC1O14908 333 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 PLCG1P19174 1290 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 FOXC1Q12948 553 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 NR1H3Q13133 447 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 MCM6Q14566 821 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 DDR2Q16832 855 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 EML3Q32P44 896 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 ZC2HC1CQ53FD0 456 aaPredicted RBP15.71■□□□□ 0.11
MCF2L-220ENST00000464800 USP39Q53GS9 565 aaKnown RBP15.71■□□□□ 0.11
MCF2L-220ENST00000464800 SH3PXD2AQ5TCZ1 1133 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 PMS2CLQ68D20 193 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 NT5DC4Q86YG4 428 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 PDCL2Q8N4E4 241 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 POMGNT1Q8WZA1 660 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 RAD54LQ92698 747 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 MYRFLQ96LU7 910 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 KIF2CQ99661 725 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 TMEM9BQ9NQ34 198 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 BLOC1S4Q9NUP1 217 aa15.71■□□□□ 0.11
MCF2L-220ENST00000464800 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.11
MCF2L-220ENST00000464800 ABCA7Q8IZY2 2146 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 KHNYNO15037 678 aaKnown RBP15.7■□□□□ 0.1
MCF2L-220ENST00000464800 CYP2F1P24903 491 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 POLR2BP30876 1174 aaKnown RBP15.7■□□□□ 0.1
MCF2L-220ENST00000464800 MYL7Q01449 175 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 INTS6LQ5JSJ4 861 aaKnown RBP15.7■□□□□ 0.1
MCF2L-220ENST00000464800 CYP2U1Q7Z449 544 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 FSIP1Q8NA03 581 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 SLC22A12Q96S37 553 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 ACBD6Q9BR61 282 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 TPSD1Q9BZJ3 242 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 ST6GALNAC4Q9H4F1 302 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 ZMIZ1Q9ULJ6 1067 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 INVSQ9Y283 1065 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 TNRC6BQ9UPQ9 1833 aaKnown RBP15.7■□□□□ 0.1
MCF2L-220ENST00000464800 LAMA1P25391 3075 aa15.7■□□□□ 0.1
MCF2L-220ENST00000464800 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-220ENST00000464800 HUS1O60921 280 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 ITGB3P05106 788 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 ACAT1P24752 427 aaKnown RBP15.69■□□□□ 0.1
MCF2L-220ENST00000464800 TFAMQ00059 246 aaKnown RBP15.69■□□□□ 0.1
MCF2L-220ENST00000464800 KCNB1Q14721 858 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 POSTNQ15063 836 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
MCF2L-220ENST00000464800 TMEM86AQ8N2M4 240 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 SH3RF2Q8TEC5 729 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 LARP4BQ92615 738 aaKnown RBP15.69■□□□□ 0.1
MCF2L-220ENST00000464800 HVCN1Q96D96 273 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 CYP2S1Q96SQ9 504 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 ADAM33Q9BZ11 813 aa15.69■□□□□ 0.1
MCF2L-220ENST00000464800 IGF2RP11717 2491 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 H3BQV1 296 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 NFATC1O95644 943 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 CEACAM1P13688 526 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 CSRP1P21291 193 aaKnown RBP15.68■□□□□ 0.1
MCF2L-220ENST00000464800 PDE6CP51160 858 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 SEC13P55735 322 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 CFAP221Q4G0U5 840 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 ANO7Q6IWH7 933 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 RASSF3Q86WH2 238 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 SFR1Q86XK3 245 aa15.68■□□□□ 0.1
MCF2L-220ENST00000464800 SPATA2LQ8IUW3 424 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-220ENST00000464800 ARL14EPQ8N8R7 260 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-220ENST00000464800 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
MCF2L-220ENST00000464800 KDF1Q8NAX2 398 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-220ENST00000464800 USP33Q8TEY7 942 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms