RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 ZWILCHQ9H900 591 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SAYSD1Q9NPB0 183 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 RAB20Q9NX57 234 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 DDX56Q9NY93 547 aaKnown RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 NYAP2Q9P242 653 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 GGT7Q9UJ14 662 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 NOCTQ9UK39 431 aaKnown RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ATXN7L1Q9ULK2 861 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 STRCQ7RTU9 1775 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 EMSYQ7Z589 1322 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 IRS2Q9Y4H2 1338 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 SBF2Q86WG5 1849 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 GREB1LQ9C091 1923 aaPredicted RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 EME2A4GXA9 379 aaPredicted RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 USP17L10C9JJH3 530 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 SPECC1L-ADORA2AF8WAN1 911 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 H0YCG3 227 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 GSC2O15499 205 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 OIP5O43482 229 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 STRNO43815 780 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 EDIL3O43854 480 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 RNF8O76064 485 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CYP11B1P15538 503 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 IVDP26440 423 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 HMGB2P26583 209 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 EPHB2P29323 1055 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 RFC4P35249 363 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 PGM1P36871 562 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 RGS2P41220 211 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 NSFP46459 744 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 SERPINB4P48594 390 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CDK7P50613 346 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 GPC3P51654 580 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 GCNT1Q02742 428 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 GABPAQ06546 454 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 MGAT5Q09328 741 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 ASPHQ12797 758 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 SFSWAPQ12872 951 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 ADRM1Q16186 407 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 TMEM132AQ24JP5 1023 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CLEC16AQ2KHT3 1053 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 QRICH1Q2TAL8 776 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CBWD6Q4V339 395 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CBWD3Q5JTY5 395 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CBWD5Q5RIA9 395 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 LRRC38Q5VT99 294 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CGB2Q6NT52 195 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 LVRNQ6Q4G3 990 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 DPP8Q6V1X1 898 aaPredicted RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 SCYL3Q8IZE3 742 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 LRRC47Q8N1G4 583 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CATSPER1Q8NEC5 780 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 C1orf216Q8TAB5 229 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 OLIG1Q8TAK6 271 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 C1orf54Q8WWF1 131 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 IRGQQ8WZA9 623 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 GATA6Q92908 595 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 TEKT1Q969V4 418 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 IFT43Q96FT9 208 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 UCN2Q96RP3 112 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 HSD17B14Q9BPX1 270 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 SYT15Q9BQS2 421 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 TSSK1BQ9BXA7 367 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 ASCC2Q9H1I8 757 aaPredicted RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 C1orf21Q9H246 121 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 CPVLQ9H3G5 476 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 EPB41L1Q9H4G0 881 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 STN1Q9H668 368 aaKnown RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 MANSC1Q9H8J5 431 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 VPS37BQ9H9H4 285 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 KIAA1586Q9HCI6 787 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 KCNQ5Q9NR82 932 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 BTG4Q9NY30 223 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 KCNK4Q9NYG8 393 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 TAS2R14Q9NYV8 317 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 NKX1-2Q9UD57 310 aaPredicted RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 RGS17Q9UGC6 210 aaPredicted RBP7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 TBK1Q9UHD2 729 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 IP6K2Q9UHH9 426 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 NARFQ9UHQ1 456 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 ANAPC7Q9UJX3 599 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 TRIM33Q9UPN9 1127 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 EFR3BQ9Y2G0 817 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 NEU2Q9Y3R4 380 aa7.55□□□□□ -1.2
CLSTN1-204ENST00000464286 STRCP1A6NGW2 1772 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 ARHGAP10A1A4S6 786 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 SIGLEC16A6NMB1 481 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 UBAP1LF5GYI3 381 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 H0Y3Z8 333 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 K7ENM7 598 aa7.54□□□□□ -1.2
CLSTN1-204ENST00000464286 MEIS1O00470 390 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms