RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 LRRC32Q14392 662 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 ZNF268Q14587 947 aaPredicted RBP14.35□□□□□ -0.11
COMMD3-205ENST00000463688 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 LRRTM3Q86VH5 581 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 UNC93AQ86WB7 457 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 ARID3BQ8IVW6 561 aaPredicted RBP14.35□□□□□ -0.11
COMMD3-205ENST00000463688 GRAMD1CQ8IYS0 662 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 TMEM105Q8N8V8 129 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 BPIFB1Q8TDL5 484 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 PI4K2AQ9BTU6 479 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 LRRC3Q9BY71 257 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 FAM126AQ9BYI3 521 aaPredicted RBP14.35□□□□□ -0.11
COMMD3-205ENST00000463688 CYP3A43Q9HB55 503 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 COMMD8Q9NX08 183 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 RAPGEFL1Q9UHV5 662 aa14.35□□□□□ -0.11
COMMD3-205ENST00000463688 FAM170BA6NMN3 283 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 VNN2O95498 520 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 PDGFBP01127 241 aaPredicted RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 CASP1P29466 404 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 CCR2P41597 374 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 NRLP54845 237 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 FKBP3Q00688 224 aaKnown RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 CETN1Q12798 172 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 ZACNQ401N2 412 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 IER5LQ5T953 404 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 ZNF658Q5TYW1 1059 aaPredicted RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 LMBRD2Q68DH5 695 aaPredicted RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 CWF19L1Q69YN2 538 aaKnown RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 TPRG1Q6ZUI0 275 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 MON1AQ86VX9 555 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 RALGPS2Q86X27 583 aaPredicted RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 FAM186BQ8IYM0 893 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 PDZD8Q8NEN9 1154 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 SLITRK1Q96PX8 696 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 TMEM209Q96SK2 561 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 SMOC2Q9H3U7 446 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 ZNF334Q9HCZ1 680 aaPredicted RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 TRPM5Q9NZQ8 1165 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 NXF1Q9UBU9 619 aaKnown RBP14.34□□□□□ -0.11
COMMD3-205ENST00000463688 ZNF318Q5VUA4 2279 aa14.34□□□□□ -0.11
COMMD3-205ENST00000463688 PDCD11Q14690 1871 aaKnown RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 TRAV19A0A0A6YYK7 116 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 PSMA7O14818 248 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 USP17L7P0C7H9 530 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 PRKCSHP14314 528 aaPredicted RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 PTPN1P18031 435 aaKnown RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 KPNA1P52294 538 aaPredicted RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 NLRP12P59046 1061 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 CYP27A1Q02318 531 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 LRRC63Q05C16 580 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 TCF15Q12870 199 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 NR1H3Q13133 447 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 PDGFRLQ15198 375 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 ZNF528Q3MIS6 628 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 TDRD10Q5VZ19 366 aaKnown RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 MAMSTRQ6ZN01 415 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 DENND5BQ6ZUT9 1274 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 GAREM2Q75VX8 874 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 C1orf210Q8IVY1 113 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 SCN4BQ8IWT1 228 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 CMTM8Q8IZV2 173 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 STKLD1Q8NE28 680 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 ZSWIM2Q8NEG5 633 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 PRSS33Q8NF86 280 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 FEZF2Q8TBJ5 459 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 GIPC2Q8TF65 315 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 C8orf48Q96LL4 319 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 RPP25Q9BUL9 199 aaKnown RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 CRISPLD1Q9H336 500 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 METTL14Q9HCE5 456 aaKnown RBP14.33□□□□□ -0.11
COMMD3-205ENST00000463688 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 TDP1Q9NUW8 608 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 FBXO4Q9UKT5 387 aa14.33□□□□□ -0.11
COMMD3-205ENST00000463688 C2orf16Q68DN1 1984 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 SLC38A8A6NNN8 435 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 PROB1E7EW31 1015 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 SLC16A3O15427 465 aaKnown RBP14.32□□□□□ -0.12
COMMD3-205ENST00000463688 LAMTOR5O43504 91 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 MOSPD3O75425 235 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 FGFR1OPO95684 399 aaKnown RBP14.32□□□□□ -0.12
COMMD3-205ENST00000463688 C4BPAP04003 597 aaKnown RBP14.32□□□□□ -0.12
COMMD3-205ENST00000463688 PDGFRBP09619 1106 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 ATF6P18850 670 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 FCARP24071 287 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 ACAT1P24752 427 aaKnown RBP14.32□□□□□ -0.12
COMMD3-205ENST00000463688 CYP2F1P24903 491 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 WNT7BP56706 349 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 MYL6P60660 151 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 NOP14P78316 857 aaKnown RBP14.32□□□□□ -0.12
COMMD3-205ENST00000463688 ANGPT1Q15389 498 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 WDR44Q5JSH3 913 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 DGKKQ5KSL6 1271 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 VITQ6UXI7 678 aa14.32□□□□□ -0.12
COMMD3-205ENST00000463688 DDX42Q86XP3 938 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms