RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 COLGALT1Q8NBJ5 622 aa19.15■□□□□ 0.66
ATPAF2-202ENST00000462733 ZNF558Q96NG5 402 aa19.15■□□□□ 0.66
ATPAF2-202ENST00000462733 PSMB7Q99436 277 aa19.15■□□□□ 0.66
ATPAF2-202ENST00000462733 SMYD3Q9H7B4 428 aa19.15■□□□□ 0.66
ATPAF2-202ENST00000462733 TMEM59LQ9UK28 342 aa19.15■□□□□ 0.66
ATPAF2-202ENST00000462733 DNAJC12Q9UKB3 198 aa19.15■□□□□ 0.66
ATPAF2-202ENST00000462733 TMEM189-UBE2V1I3L0A0 370 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 H2AFZP0C0S5 128 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 P4HA1P13674 534 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 ASPAP45381 313 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 RAP1GAPP47736 663 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 CUL2Q13617 745 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 H2AFVQ71UI9 128 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 ACTRT1Q8TDG2 376 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 SENP8Q96LD8 212 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 PACSIN1Q9BY11 444 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 ADAM28Q9UKQ2 775 aa19.14■□□□□ 0.66
ATPAF2-202ENST00000462733 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 CYB561D2O14569 222 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 WEE2P0C1S8 567 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 PBX2P40425 430 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 CDH8P55286 799 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 SLFN11Q7Z7L1 901 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 FAM76AQ8TAV0 307 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 WHAMMQ8TF30 809 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 BCL7CQ8WUZ0 217 aaPredicted RBP19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 KREMEN1Q96MU8 473 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 STK33Q9BYT3 514 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 AAASQ9NRG9 546 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 GDAP2Q9NXN4 497 aa19.14■□□□□ 0.65
ATPAF2-202ENST00000462733 NLRC5Q86WI3 1866 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 NCANO14594 1321 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 LINC01553A4QN01 128 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 A6NNZ2 444 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 SHOX2O60902 331 aaPredicted RBP19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 HSF2BPO75031 334 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 CA3P07451 260 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 LINC00271P0C7V0 271 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 CD58P19256 250 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 TBXAS1P24557 533 aaPredicted RBP19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 TUBB8Q3ZCM7 444 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 MS4A14Q96JA4 679 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 SMARCAL1Q9NZC9 954 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 EHD2Q9NZN4 543 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 PCDHB12Q9Y5F1 795 aa19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 TIMM13Q9Y5L4 95 aaPredicted RBP19.13■□□□□ 0.65
ATPAF2-202ENST00000462733 GOLGA6CA6NDK9 693 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 HUS1O60921 280 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 ARHGEF15O94989 841 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 HEXIM1O94992 359 aaKnown RBP19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 GOLGA6DP0CG33 693 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 SOX5P35711 763 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 MFAP3P55082 362 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 GCNT1Q02742 428 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 SLC39A11Q8N1S5 342 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 TPCN2Q8NHX9 752 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 CLP1Q92989 425 aaKnown RBP19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 IGSF21Q96ID5 467 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 RUFY1Q96T51 708 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 PBX4Q9BYU1 374 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 GPR62Q9BZJ7 368 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 SDCBP2Q9H190 292 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 GOLGA6AQ9NYA3 693 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 YBX2Q9Y2T7 364 aaKnown RBP19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 PCDHA11Q9Y5I1 949 aa19.12■□□□□ 0.65
ATPAF2-202ENST00000462733 F8VZ95 297 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 CCDC188H7C350 402 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SLC7A5Q01650 507 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 DRAP1Q14919 205 aaPredicted RBP19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SOWAHAQ2M3V2 549 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 FUT10Q6P4F1 479 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 APPL2Q8NEU8 664 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SLC30A5Q8TAD4 765 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 TMEM169Q96HH4 297 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SUSD3Q96L08 255 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 MRPL45Q9BRJ2 306 aaKnown RBP19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 BCO2Q9BYV7 579 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 TSPYL1Q9H0U9 437 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SPG21Q9NZD8 308 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SF3B1O75533 1304 aaKnown RBP eCLIP19.11■□□□□ 0.651e-7■■■■■ 172.3
ATPAF2-202ENST00000462733 PGRMC1O00264 195 aaKnown RBP19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 TRAPPC3O43617 180 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 ODC1P11926 461 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 PAX3P23760 479 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 CTNNB1P35222 781 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 FAM171A1Q5VUB5 890 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 WSCD1Q658N2 575 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 ENOSF1Q7L5Y1 443 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 SPRED2Q7Z698 418 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 TOP6BLQ8N6T0 577 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 C1orf131Q8NDD1 294 aaKnown RBP19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 FAM81BQ96LP2 452 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 PRO3102Q9H379 93 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 MTUS1Q9ULD2 1270 aa19.11■□□□□ 0.65
ATPAF2-202ENST00000462733 VWA8A3KMH1 1905 aa19.1■□□□□ 0.65
ATPAF2-202ENST00000462733 M0QZQ0 153 aa19.1■□□□□ 0.65
ATPAF2-202ENST00000462733 TULP2O00295 520 aa19.1■□□□□ 0.65
ATPAF2-202ENST00000462733 DDX3XO00571 662 aaKnown RBP eCLIP19.1■□□□□ 0.65
ATPAF2-202ENST00000462733 USP8P40818 1118 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms