RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 NFU1Q9UMS0 254 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 NAALADL1Q9UQQ1 740 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 SCRIBQ14160 1630 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 PNPLA7Q6ZV29 1317 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 LOC105369274A0A096LPK9 316 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 LOC102723532A0A0G2JNH3 316 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 DCLK1O15075 740 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 CYP2C9P11712 490 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 HTR7P34969 479 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 AARSP49588 968 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMC4-203ENST00000462668 NFYCQ13952 458 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ARHGEF7Q14155 803 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 KRT32Q14532 448 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 PCOLCEQ15113 449 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 PRAMEF14Q5SWL7 426 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ETV3LQ6ZN32 361 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 OR4N4Q8N0Y3 316 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 LPPQ93052 612 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 ATP2A3Q93084 1043 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 MPHOSPH8Q99549 860 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 CARS2Q9HA77 564 aaKnown RBP3.41□□□□□ -1.86
SMC4-203ENST00000462668 ERVK-5Q9HDB9 667 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 DNAJC16Q9Y2G8 782 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMC4-203ENST00000462668 GPRASP1Q5JY77 1395 aa3.41□□□□□ -1.86
SMC4-203ENST00000462668 C2orf78A6NCI8 922 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 WFS1O76024 890 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 CD1AP06126 327 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 GYPEP15421 78 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 KIR2DL3P43628 341 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 NPTX2P47972 431 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 CDC16Q13042 620 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 TBCCQ15814 346 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 GALNTL6Q49A17 601 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 GADL1Q6ZQY3 521 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 BEND7Q8N7W2 519 aaPredicted RBP3.4□□□□□ -1.86
SMC4-203ENST00000462668 CEP95Q96GE4 821 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 HIC2Q96JB3 615 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 TMLHEQ9NVH6 421 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 PPP1R14DQ9NXH3 145 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 NDUFAF4Q9P032 175 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 A8MXE2 369 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 E9PLN8 166 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 FSTP19883 344 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 BSGP35613 385 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 ALDH1A3P47895 512 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 IFI35P80217 286 aaPredicted RBP3.4□□□□□ -1.86
SMC4-203ENST00000462668 MAP3K12Q12852 859 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 VASNQ6EMK4 673 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 PARS2Q7L3T8 475 aaKnown RBP3.4□□□□□ -1.86
SMC4-203ENST00000462668 PXKQ7Z7A4 578 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 TICAM1Q8IUC6 712 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 GFM2Q969S9 779 aaKnown RBP3.4□□□□□ -1.86
SMC4-203ENST00000462668 TRAPPC9Q96Q05 1148 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 VKORC1Q9BQB6 163 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 ADPGKQ9BRR6 497 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 HEYLQ9NQ87 328 aaPredicted RBP3.4□□□□□ -1.86
SMC4-203ENST00000462668 PIM2Q9P1W9 311 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 CFAP97Q9P2B7 532 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 AGAP1Q9UPQ3 857 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 YBX2Q9Y2T7 364 aaKnown RBP3.4□□□□□ -1.86
SMC4-203ENST00000462668 ACTL7AQ9Y615 435 aa3.4□□□□□ -1.86
SMC4-203ENST00000462668 DNPH1O43598 174 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 XRCC6P12956 609 aaKnown RBP eCLIP3.4□□□□□ -1.87
SMC4-203ENST00000462668 IDEP14735 1019 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 TACR1P25103 407 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 MLH1P40692 756 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 POLD2P49005 469 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 PRR5P85299 388 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 HGFACQ04756 655 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 MFSD14BQ5SR56 506 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 FBXO38Q6PIJ6 1188 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 KLHL17Q6TDP4 642 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 RSPH3Q86UC2 560 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 CABP7Q86V35 215 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 RHOT2Q8IXI1 618 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 CCDC105Q8IYK2 499 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 SH2D3CQ8N5H7 860 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 AOPEPQ8N6M6 819 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 NFKBIDQ8NI38 313 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 POC1BQ8TC44 478 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 SYT17Q9BSW7 474 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 NOD2Q9HC29 1040 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 TMEM140Q9NV12 185 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 XPR1Q9UBH6 696 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 CPA4Q9UI42 421 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 CD207Q9UJ71 328 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 VPS28Q9UK41 221 aa3.4□□□□□ -1.87
SMC4-203ENST00000462668 CCDC78A2IDD5 438 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 GAGE10A6NGK3 116 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 ITGB2P05107 769 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 RGS2P41220 211 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 ETV4P43268 484 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 ATG16L1Q676U5 607 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 BICRALQ6AI39 1079 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 GET4Q7L5D6 327 aaPredicted RBP3.39□□□□□ -1.87
SMC4-203ENST00000462668 RNF169Q8NCN4 708 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 CCDC191Q8NCU4 936 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 NEDD1Q8NHV4 660 aa3.39□□□□□ -1.87
SMC4-203ENST00000462668 MBD3L2Q8NHZ7 208 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms