RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 BANPQ8N9N5 519 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 FLAD1Q8NFF5 587 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 RFWD2Q8NHY2 731 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 TTC8Q8TAM2 541 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CCDC110Q8TBZ0 833 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF483Q8TF39 744 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 BSNDQ8WZ55 320 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 LPAR1Q92633 364 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 APBB2Q92870 758 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ELMO3Q96BJ8 720 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 PTCD3Q96EY7 689 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 APOPT1Q96IL0 206 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 NSL1Q96IY1 281 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF333Q96JL9 665 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CDHR1Q96JP9 859 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 PRMT6Q96LA8 375 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 TRAPPC9Q96Q05 1148 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 RMDN3Q96TC7 470 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 SH2D3AQ9BRG2 576 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 PDCD2LQ9BRP1 358 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 NTPCRQ9BSD7 190 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 BTBD10Q9BSF8 475 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 DHRS4Q9BTZ2 278 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 MSTO1Q9BUK6 570 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CCDC28BQ9BUN5 200 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM120AQ9BXJ8 343 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 MAK16Q9BXY0 300 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF341Q9BYN7 854 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 FRMD8Q9BZ67 464 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 NIF3L1Q9GZT8 377 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 VPS11Q9H270 941 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 DENND2DQ9H6A0 471 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ACSS3Q9H6R3 686 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 SYNCQ9H7C4 482 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 MANSC1Q9H8J5 431 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 VRTNQ9H8Y1 702 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 APOBEC3GQ9HC16 384 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 RAVER2Q9HCJ3 691 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 PXMP2Q9NR77 195 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 HOMER2Q9NSB8 354 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 GINM1Q9NU53 330 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ARL8BQ9NVJ2 186 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 NMRK1Q9NWW6 199 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 COL20A1Q9P218 1284 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CPSF2Q9P2I0 782 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 PDP2Q9P2J9 529 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ARHGAP28Q9P2N2 729 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 GABBR1Q9UBS5 961 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF70Q9UC06 446 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF212Q9UDV6 495 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 SEPT9Q9UHD8 586 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 XPO7Q9UIA9 1087 aaKnown RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 DCTN4Q9UJW0 460 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 GRID1Q9ULK0 1009 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 STRIP2Q9ULQ0 834 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CNTN6Q9UQ52 1028 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 ZBTB12Q9Y330 459 aaPredicted RBP3.69□□□□□ -1.82
COL8A1-204ENST00000462604 PCDHA10Q9Y5I2 948 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 SNCAIPQ9Y6H5 919 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 STYXL1Q9Y6J8 313 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 MYH13Q9UKX3 1938 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 LRRC37AA6NMS7 1700 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 CLUHO75153 1309 aa3.69□□□□□ -1.82
COL8A1-204ENST00000462604 THSD7AQ9UPZ6 1657 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 A0A0B4J269 797 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 A0A1W2PPM1 405 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 WDR91A4D1P6 747 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CFAP69A5D8W1 941 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 DPPA5A6NC42 116 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MAGEA13PA6NCF6 341 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 LRRIQ4A6NIV6 560 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ENO4A6NNW6 628 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 E7ESA3 106 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 F8VP50 259 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 F8W8V4 182 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SPECC1L-ADORA2AF8WAN1 911 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GOLGA8SH3BPF8 625 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GOLGA8MH3BSY2 632 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FCHO1O14526 889 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 COPEO14579 308 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KLF11O14901 512 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GSC2O15499 205 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MAFGO15525 162 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MED7O43513 233 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ATP9AO75110 1047 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ENTPD5O75356 428 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KRT36O76013 467 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KRT37O76014 449 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 PSMG1O95456 288 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TNNC2P02585 160 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SUPT20HL2P0C7V6 817 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GNAT1P11488 350 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 HARSP12081 509 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ETS1P14921 441 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GM2AP17900 193 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KCNA3P22001 575 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SP100P23497 879 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 EIF4BP23588 611 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms