RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 POLNQ7Z5Q5 900 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 KIAA0319LQ8IZA0 1049 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 GBP7Q8N8V2 638 aaPredicted RBP17.8■□□□□ 0.44
ACTB-207ENST00000462494 SLC35B2Q8TB61 432 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 RSAD2Q8WXG1 361 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 CPXM1Q96SM3 734 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 PLCD4Q9BRC7 762 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 PRKAG3Q9UGI9 489 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 SHOC2Q9UQ13 582 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 ACKR2O00590 384 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 MED7O43513 233 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 PIAS1O75925 651 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 KRT7P08729 469 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 CLCN3P51790 818 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 IRX3P78415 501 aaPredicted RBP17.8■□□□□ 0.44
ACTB-207ENST00000462494 DNAJC3Q13217 504 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 ZNF667Q5HYK9 610 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 DPH6Q7L8W6 267 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 SPOCK2Q92563 424 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 HSPH1Q92598 858 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 TBC1D31Q96DN5 1066 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 SPATA33Q96N06 139 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 RPF1Q9H9Y2 349 aaKnown RBP17.8■□□□□ 0.44
ACTB-207ENST00000462494 RXFP1Q9HBX9 757 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 LOC285556D6RIA3 1793 aa17.8■□□□□ 0.44
ACTB-207ENST00000462494 CSDE1O75534 798 aaKnown RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 ASMTLO95671 621 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 PROZP22891 400 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 KDELR1P24390 212 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 RPA3P35244 121 aaPredicted RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 ANKRD22Q5VYY1 191 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 CCDC91Q7Z6B0 441 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 TDRPQ86YL5 185 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 KIF2BQ8N4N8 673 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 KCTD6Q8NC69 237 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 NOD2Q9HC29 1040 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 UBN1Q9NPG3 1134 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 WDR90Q96KV7 1748 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 A0A1W2PPM1 405 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 IGF2BP3O00425 579 aaKnown RBP eCLIP17.79■□□□□ 0.445e-9■■■■□ 20.1
ACTB-207ENST00000462494 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 B4GALT4O60513 344 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 ITGBL1O95965 494 aaPredicted RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 ERBB2P04626 1255 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 NQO1P15559 274 aaKnown RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 CA4P22748 312 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 RAD23BP54727 409 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 MGAT5Q09328 741 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 BNIP1Q12981 228 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 SPARCL1Q14515 664 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 CELF3Q5SZQ8 465 aaKnown RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 FNBP1LQ5T0N5 605 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 EFCAB12Q6NXP0 572 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 PCGF5Q86SE9 256 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 RFX6Q8HWS3 928 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 DHX37Q8IY37 1157 aaKnown RBP17.79■□□□□ 0.44
ACTB-207ENST00000462494 PYROXD1Q8WU10 500 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 COPS5Q92905 334 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 KLHL29Q96CT2 875 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 PPP1R16BQ96T49 567 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 SMYD3Q9H7B4 428 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 MINDY3Q9H8M7 445 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 PTPRHQ9HD43 1115 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 HMGXB4Q9UGU5 601 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 PPP2R3BQ9Y5P8 575 aa17.79■□□□□ 0.44
ACTB-207ENST00000462494 IGKV6-21A0A0C4DH24 114 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 NFICP08651 508 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 SSTR1P30872 391 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 GPX6P59796 221 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 IGBP1P78318 339 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 MYO1EQ12965 1108 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 TFDP1Q14186 410 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 EFTUD2Q15029 972 aaKnown RBP eCLIP17.78■□□□□ 0.441e-36■■■■■ 39.6
ACTB-207ENST00000462494 TAF5Q15542 800 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 XYLT1Q86Y38 959 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 FBXO16Q8IX29 292 aaPredicted RBP17.78■□□□□ 0.44
ACTB-207ENST00000462494 PPIL6Q8IXY8 311 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 CPT1BQ92523 772 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 GRAMD1AQ96CP6 724 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 SDCBP2Q9H190 292 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 CDT1Q9H211 546 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 LHX5Q9H2C1 402 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 PSMC3IPQ9P2W1 217 aaPredicted RBP17.78■□□□□ 0.44
ACTB-207ENST00000462494 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.78■□□□□ 0.44
ACTB-207ENST00000462494 PPME1Q9Y570 386 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 CSADQ9Y600 493 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 LTBP3Q9NS15 1303 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 BRCA1P38398 1863 aaKnown RBP17.78■□□□□ 0.44
ACTB-207ENST00000462494 NDC80O14777 642 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.442e-11■■■□□ 17.4
ACTB-207ENST00000462494 ITGB3P05106 788 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 CCDC142Q17RM4 750 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 MSS51Q4VC12 460 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 WDR78Q5VTH9 848 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 ECHDC2Q86YB7 292 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 EXOC8Q8IYI6 725 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 C1orf127Q8N9H9 656 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 TWNKQ96RR1 684 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 CALN1Q9BXU9 219 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms