RNA–Protein interactions for RNA: ENST00000461720.5

COL11A1-206, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-206ENST00000461720 SCN4BQ8IWT1 228 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 NELFCDQ8IXH7 590 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 SPEM1Q8N4L4 309 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
COL11A1-206ENST00000461720 FSIP1Q8NA03 581 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 XXYLT1Q8NBI6 393 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 NELL1Q92832 810 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 CCDC127Q96BQ5 260 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 TRMT2BQ96GJ1 504 aaKnown RBP13.47□□□□□ -0.25
COL11A1-206ENST00000461720 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 LRRC3BQ96PB8 259 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
COL11A1-206ENST00000461720 SNX25Q9H3E2 840 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 TDP1Q9NUW8 608 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 MAGEC2Q9UBF1 373 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-206ENST00000461720 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 COL4A2P08572 1712 aa13.47□□□□□ -0.25
COL11A1-206ENST00000461720 EP300Q09472 2414 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-206ENST00000461720 CLIC2O15247 247 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 TGFB1I1O43294 461 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 LILRB5O75023 590 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 ANXA13P27216 316 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 HOXD13P35453 343 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 MAGEA11P43364 429 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 AFMP43652 599 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 GPR15P49685 360 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 TNK2Q07912 1038 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 TRPC3Q13507 836 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 PON2Q15165 354 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 RESP18Q5W5W9 173 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 ERMP1Q7Z2K6 904 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 TMEM150AQ86TG1 271 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 OSTM1Q86WC4 334 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SYNPOQ8N3V7 929 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SPRYD3Q8NCJ5 442 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 USP13Q92995 863 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-206ENST00000461720 EXOC4Q96A65 974 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 PKMYT1Q99640 499 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 CGRRF1Q99675 332 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SYT15Q9BQS2 421 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 BLZF1Q9H2G9 400 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 TRPC7Q9HCX4 862 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SLC39A2Q9NP94 309 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 EHD2Q9NZN4 543 aa13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SMG5Q9UPR3 1016 aaKnown RBP13.46□□□□□ -0.25
COL11A1-206ENST00000461720 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.26
COL11A1-206ENST00000461720 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 MYO15AQ9UKN7 3530 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 TRAV19A0A0A6YYK7 116 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 EXOC3O60645 756 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 PHACTR2O75167 634 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 NOL4O94818 638 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 CLSTN1O94985 981 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 USP17L7P0C7H9 530 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 WARSP23381 471 aaKnown RBP13.45□□□□□ -0.26
COL11A1-206ENST00000461720 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
COL11A1-206ENST00000461720 GRIK1P39086 918 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 PDE6CP51160 858 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 TNNC1P63316 161 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 CYP27A1Q02318 531 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 CYP24A1Q07973 514 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 GRSF1Q12849 480 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL11A1-206ENST00000461720 RUNX3Q13761 415 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 PSMD6Q15008 389 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 KNOP1Q1ED39 458 aaKnown RBP13.45□□□□□ -0.26
COL11A1-206ENST00000461720 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 VSTM1Q6UX27 236 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 MYRFLQ96LU7 910 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
COL11A1-206ENST00000461720 GMEB2Q9UKD1 530 aa13.45□□□□□ -0.26
COL11A1-206ENST00000461720 ATP2C2O75185 946 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 CKMP06732 381 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 SLFN14P0C7P3 912 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 LMO2P25791 158 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 CASP1P29466 404 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 PSMC1P62191 440 aaKnown RBP13.44□□□□□ -0.26
COL11A1-206ENST00000461720 SATB1Q01826 763 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
COL11A1-206ENST00000461720 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
COL11A1-206ENST00000461720 EHHADHQ08426 723 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 CUL4BQ13620 913 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 ZNF268Q14587 947 aaPredicted RBP13.44□□□□□ -0.26
COL11A1-206ENST00000461720 KCNB1Q14721 858 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 PDGFRLQ15198 375 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 BMT2Q1RMZ1 405 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 WDR72Q3MJ13 1102 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 SCARA3Q6AZY7 606 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 TXNDC11Q6PKC3 985 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 LIMS2Q7Z4I7 341 aa13.44□□□□□ -0.26
COL11A1-206ENST00000461720 DCLK2Q8N568 766 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms