RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CFAP221Q4G0U5 840 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 PHLDB3Q6NSJ2 640 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 SPATA2LQ8IUW3 424 aaPredicted RBP23.92■■□□□ 1.42
C9orf3-209ENST00000460573 ATAD1Q8NBU5 361 aa23.92■■□□□ 1.42
C9orf3-209ENST00000460573 ATP2C2O75185 946 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 VNN2O95498 520 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 SP100P23497 879 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-209ENST00000460573 KCNMA1Q12791 1236 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 DUSP4Q13115 394 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 PLD1Q13393 1074 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 RRAGAQ7L523 313 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 ARHGEF19Q8IW93 802 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 UBR7Q8N806 425 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 WHAMMQ8TF30 809 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 ARID3AQ99856 593 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 PRKD2Q9BZL6 878 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 S1PR5Q9H228 398 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 ADAM7Q9H2U9 754 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 DPEP3Q9H4B8 488 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 UBE2TQ9NPD8 197 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-209ENST00000460573 C11orf16Q9NQ32 467 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 TMLHEQ9NVH6 421 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 ABI2Q9NYB9 513 aaPredicted RBP23.91■■□□□ 1.42
C9orf3-209ENST00000460573 INSL5Q9Y5Q6 135 aa23.91■■□□□ 1.42
C9orf3-209ENST00000460573 CCDC195A0A1B0GUA6 201 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 XYLBO75191 536 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 LRG1P02750 347 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 RFX1P22670 979 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 UBXN1Q04323 297 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 MDH1BQ5I0G3 518 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 RARS2Q5T160 578 aaKnown RBP23.9■■□□□ 1.42
C9orf3-209ENST00000460573 ACOT1Q86TX2 421 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 TMEM176AQ96HP8 235 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 RIPOR3Q96MK2 946 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 PLCB1Q9NQ66 1216 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 NR2E1Q9Y466 385 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 DAAM1Q9Y4D1 1078 aa23.9■■□□□ 1.42
C9orf3-209ENST00000460573 SERPINC1P01008 464 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 ALDH1A3P47895 512 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 VSTM1Q6UX27 236 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 GPR149Q86SP6 731 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 C12orf76Q8N812 135 aaPredicted RBP23.89■■□□□ 1.41
C9orf3-209ENST00000460573 MYLPFQ96A32 169 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 PCED1BQ96HM7 432 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 NECTIN4Q96NY8 510 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 ERGIC2Q96RQ1 377 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 SIX2Q9NPC8 291 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 HMGXB4Q9UGU5 601 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 SLC27A5Q9Y2P5 690 aa23.89■■□□□ 1.41
C9orf3-209ENST00000460573 ATP8B3O60423 1300 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 LOC730098B7Z3J9 87 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 RFPL2O75678 378 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 HAPLN1P10915 354 aaPredicted RBP23.88■■□□□ 1.41
C9orf3-209ENST00000460573 ACO1P21399 889 aaKnown RBP23.88■■□□□ 1.41
C9orf3-209ENST00000460573 MAGEA11P43364 429 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 CYP27A1Q02318 531 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 MGAT5BQ3V5L5 792 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 ATAT1Q5SQI0 421 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 TMC5Q6UXY8 1006 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 ELMOD1Q8N336 334 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 SUSD6Q92537 303 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 TWNKQ96RR1 684 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 ELOVL4Q9GZR5 314 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 RTN4Q9NQC3 1192 aaKnown RBP23.88■■□□□ 1.41
C9orf3-209ENST00000460573 KIAA1257Q9ULG3 409 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 YIPF1Q9Y548 306 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 PCDHB4Q9Y5E5 795 aa23.88■■□□□ 1.41
C9orf3-209ENST00000460573 A0A1B0GTH6 734 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 PAEPP09466 180 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 MTHFRP42898 656 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 RAD23BP54727 409 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 EPHB3P54753 998 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 RPL10AP62906 217 aaKnown RBP23.87■■□□□ 1.41
C9orf3-209ENST00000460573 KLHDC7AQ5VTJ3 777 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 SLC4A11Q8NBS3 891 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 SMG7Q92540 1137 aaKnown RBP23.87■■□□□ 1.41
C9orf3-209ENST00000460573 KAT5Q92993 513 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 ZNF707Q96C28 371 aaPredicted RBP23.87■■□□□ 1.41
C9orf3-209ENST00000460573 CEP295NLQ96MC4 621 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 HEXIM2Q96MH2 286 aaKnown RBP23.87■■□□□ 1.41
C9orf3-209ENST00000460573 KREMEN1Q96MU8 473 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 SEPT5Q99719 369 aaPredicted RBP23.87■■□□□ 1.41
C9orf3-209ENST00000460573 LSM14BQ9BX40 385 aaKnown RBP23.87■■□□□ 1.41
C9orf3-209ENST00000460573 CRISPLD1Q9H336 500 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 PIDD1Q9HB75 910 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 CNTN6Q9UQ52 1028 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 ASB3Q9Y575 518 aa23.87■■□□□ 1.41
C9orf3-209ENST00000460573 CYP2F1P24903 491 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 FANCCQ00597 558 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 TWF1Q12792 350 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 ZNF394Q53GI3 561 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 DPY19L2P1Q6NXN4 242 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 TMEM270Q6UE05 265 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 ZNF512Q96ME7 567 aaPredicted RBP23.86■■□□□ 1.41
C9orf3-209ENST00000460573 B3GNT5Q9BYG0 378 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 DNAJC12Q9UKB3 198 aa23.86■■□□□ 1.41
C9orf3-209ENST00000460573 CCL16O15467 120 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 BDNFP23560 247 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 ORC1Q13415 861 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 SYCP1Q15431 976 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms