RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 VAT1Q99536 393 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ASAP1Q9ULH1 1129 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MYL2P10916 166 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 H2AFXP16104 143 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CAPGP40121 348 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PPIL2Q13356 520 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 C1orf228Q6PIY5 440 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF564Q8TBZ8 553 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 AHSPQ9NZD4 102 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MYRFQ9Y2G1 1151 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 GSTK1Q9Y2Q3 226 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CSADQ9Y600 493 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ZGRF1Q86YA3 2104 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 NAV3Q8IVL0 2385 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PREX1Q8TCU6 1659 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MTCL1Q9Y4B5 1905 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 HMBSP08397 361 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 IMPDH2P12268 514 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 IL13P35225 146 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 DDR1Q08345 913 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PLS1Q14651 629 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MESDQ14696 234 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MROH9Q5TGP6 573 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TTC23Q5W5X9 447 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 LPAR1Q92633 364 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SEC16BQ96JE7 1060 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 OSBPL11Q9BXB4 747 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RPF1Q9H9Y2 349 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 GMIPQ9P107 970 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 GTF3C4Q9UKN8 822 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 BTBD3Q9Y2F9 522 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PCDHB2Q9Y5E7 798 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SH2B2O14492 632 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SOAT2O75908 522 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ACADLP28330 430 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PSMC6P62333 389 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CREMQ03060 361 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RBL2Q08999 1139 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 VPS72Q15906 364 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CYP4F22Q6NT55 531 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ZCCHC8Q6NZY4 707 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ADHFE1Q8IWW8 467 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CLEC4FQ8N1N0 589 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PIGOQ8TEQ8 1089 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RBM15Q96T37 977 aaKnown RBP eCLIP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RACGAP1Q9H0H5 632 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF180Q9UJW8 692 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 USTQ9Y2C2 406 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TRIM17Q9Y577 477 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 COL6A6A6NMZ7 2263 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 GLRA3O75311 464 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TAF5LO75529 589 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ITGA2P17301 1181 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CDH6P55285 790 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 GET4Q7L5D6 327 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SNX31Q8N9S9 440 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 GOLPH3Q9H4A6 298 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CATSPERBQ9H7T0 1116 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 KCNK4Q9NYG8 393 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PARP3Q9Y6F1 533 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TCP11X1B4DZS4 312 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ANP32DO95626 131 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ABHD2P08910 425 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 EIF6P56537 245 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ACTR2P61160 394 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 DPYSQ14117 519 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SUPT20HL1Q3ZLR7 823 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TMEM179Q6ZVK1 233 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SCUBE1Q8IWY4 988 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FCGR1BQ92637 280 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 L3MBTL3Q96JM7 780 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MNTQ99583 582 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 C7orf25Q9BPX7 421 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FHDC1Q9C0D6 1143 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 DNPEPQ9ULA0 475 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 AAR2Q9Y312 384 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TEX28O15482 410 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 DYRK3O43781 588 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 DGAT1O75907 488 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MAGEA4P43358 317 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CTCFP49711 727 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CNTN1Q12860 1018 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CDH18Q13634 790 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 KCNT1Q5JUK3 1230 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MFSD14BQ5SR56 506 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 INTS11Q5TA45 600 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 FAM193BQ96PV7 902 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RPAP3Q9H6T3 665 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 RAD18Q9NS91 495 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ZBTB12Q9Y330 459 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SH3GLB1Q9Y371 365 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 K7ERI5 159 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PSMD11O00231 422 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 TOM1O60784 492 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 CD2BP2O95400 341 aaKnown RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 VAV1P15498 845 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 PRAMEP78395 509 aa5.41□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF200P98182 395 aaPredicted RBP5.41□□□□□ -1.54
CSMD3-204ENST00000455883 SCRN1Q12765 414 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms