RNA–Protein interactions for RNA: ENST00000454349.6

TNRC6B-206, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNRC6B, Length 18,279 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-206ENST00000454349 CYP7A1P22680 504 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 HDLBPQ00341 1268 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 SLC18A3Q16572 532 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 DCAF15Q66K64 600 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 TUBGCP5Q96RT8 1024 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 POLIQ9UNA4 740 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 GSTT2BP0CG30 244 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 EPCAMP16422 314 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 HUNKP57058 714 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ALKBH5Q6P6C2 394 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ZDHHC13Q8IUH4 622 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 IFT43Q96FT9 208 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 FBXW4P57775 412 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 SCN1BQ07699 218 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 FGL1Q08830 312 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 TMEM44Q2T9K0 475 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 CCDC81Q6ZN84 652 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 TMEM17Q86X19 198 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 CKAP2Q8WWK9 683 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 CENPIQ92674 756 aaPredicted RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ZNF496Q96IT1 587 aaPredicted RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 KCND1Q9NSA2 647 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 CFLARO15519 480 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 GNAT1P11488 350 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 STXBP2Q15833 593 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 VPS72Q15906 364 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ME3Q16798 604 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ZNF248Q8NDW4 579 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 PLEKHG3A1L390 1219 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 H7C2Y5 167 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ATP6V1C1P21283 382 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 FAM98BQ52LJ0 330 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 TBC1D15Q8TC07 691 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 RNFT2Q96EX2 444 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 PNPLA3Q9NST1 481 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 MAD2L2Q9UI95 211 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 LOC110117498-PIK3R3F6TDL0 507 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ATP6V1G2O95670 118 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 FESP07332 822 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 SCTRP47872 440 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 CASP12Q6UXS9 341 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 CCDC60Q8IWA6 550 aaPredicted RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 TMEM35BQ8NCS4 154 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 C1orf131Q8NDD1 294 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ATXN2LQ8WWM7 1075 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 PIK3R3Q92569 461 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 ZSCAN10Q96SZ4 725 aaPredicted RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 DPH5Q9H2P9 285 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 NOL11Q9H8H0 719 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 HHATLQ9HCP6 504 aa5.49□□□□□ -1.53
TNRC6B-206ENST00000454349 POU1F1P28069 291 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 RPL4P36578 427 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 TTC23Q5W5X9 447 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 PIK3AP1Q6ZUJ8 805 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 MIER2Q8N344 545 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 C9orf43Q8TAL5 461 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ECSITQ9BQ95 431 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 MANSC1Q9H8J5 431 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 GPC6Q9Y625 555 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ROR1Q01973 937 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 TTLL9Q3SXZ7 439 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 KIAA1841Q6NSI8 718 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 SNRNP27Q8WVK2 155 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 PTCD3Q96EY7 689 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 EIF2S3P41091 472 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 PGAP1Q75T13 922 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 HEATR4Q86WZ0 1026 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 COL23A1Q86Y22 540 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ZBED8Q8IZ13 594 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ZBTB9Q96C00 473 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 COMMD8Q9NX08 183 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 TCP11X1B4DZS4 312 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 CCNA1P78396 465 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 SHROOM1Q2M3G4 852 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 KCNV1Q6PIU1 500 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 CCDC17Q96LX7 622 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 MYD88Q99836 296 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 USP44Q9H0E7 712 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 PRDM5Q9NQX1 630 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 EIF3LQ9Y262 564 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 MEMO1Q9Y316 297 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 EDC4Q6P2E9 1401 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 KIAA0586Q9BVV6 1533 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ZBTB7BO15156 539 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 CHN2P52757 468 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 C1QBPQ07021 282 aaKnown RBP5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 FAPQ12884 760 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 KCNB1Q14721 858 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 SPATA4Q8NEY3 305 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 CAVIN3Q969G5 261 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 FAM86C1Q9NVL1 165 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 FANCLQ9NW38 375 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 PRAG1Q86YV5 1406 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ADD2P35612 726 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ALDH3A2P51648 485 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 DPYSQ14117 519 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 ARHGEF19Q8IW93 802 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.48□□□□□ -1.532e-6■■■■■ 40.9
TNRC6B-206ENST00000454349 AGR3Q8TD06 166 aa5.48□□□□□ -1.53
TNRC6B-206ENST00000454349 OTUD7AQ8TE49 926 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms