RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 IGFBP6P24592 240 aaPredicted RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 HOXA9P31269 272 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 OR1D2P34982 312 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 ASPAP45381 313 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 CLCN4P51793 760 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 ROR1Q01973 937 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 GCNT1Q02742 428 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 INCA1Q0VD86 236 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 HYAL1Q12794 435 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 GPR17Q13304 367 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 PLD1Q13393 1074 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 KRT31Q15323 416 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 EXOC3L4Q17RC7 722 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 LIN9Q5TKA1 542 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 PRSS55Q6UWB4 352 aaPredicted RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 CCDC149Q6ZUS6 474 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 DHX40Q8IX18 779 aaKnown RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 MAFAQ8NHW3 353 aaPredicted RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 SLC22A17Q8WUG5 538 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 AUTS2Q8WXX7 1259 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 TNIP3Q96KP6 325 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 B3GALT6Q96L58 329 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 CLSTN3Q9BQT9 956 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 ARHGAP9Q9BRR9 750 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 CBX8Q9HC52 389 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 ABCB6Q9NP58 842 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 DDX43Q9NXZ2 648 aaKnown RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 GCNT4Q9P109 453 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 NXF1Q9UBU9 619 aaKnown RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 AFF4Q9UHB7 1163 aaKnown RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 CDH9Q9ULB4 789 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 BARX2Q9UMQ3 279 aaPredicted RBP9.3□□□□□ -0.92
COL28A1-205ENST00000453441 MAP4K5Q9Y4K4 846 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 SZT2Q5T011 3432 aa9.3□□□□□ -0.92
COL28A1-205ENST00000453441 LGALS16A8MUM7 142 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ABLIM3O94929 683 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 PAPLNO95428 1278 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 TPM3P06753 285 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 HNRNPA1P09651 372 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ATF2P15336 505 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ELF1P32519 619 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 GNL1P36915 607 aaPredicted RBP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 COPB1P53618 953 aaKnown RBP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ADAM15Q13444 863 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 CUL2Q13617 745 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 KCNC3Q14003 757 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 AAK1Q2M2I8 961 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 MIIPQ5JXC2 388 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ZNF787Q6DD87 383 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 LILRA6Q6PI73 481 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 TRIM65Q6PJ69 517 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 C4orf50Q6ZRC1 276 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ADGRD2Q7Z7M1 963 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 MICALL1Q8N3F8 863 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 CMASQ8NFW8 434 aaPredicted RBP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 OR6B3Q8NGW1 331 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 LMO3Q8TAP4 145 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 SPPL2BQ8TCT7 592 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 EPS8L1Q8TE68 723 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 KBTBD7Q8WVZ9 684 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 SEMA4DQ92854 862 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 FAM84AQ96KN4 292 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 CEP295NLQ96MC4 621 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 INTS2Q9H0H0 1204 aaKnown RBP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 SFXN1Q9H9B4 322 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ZDHHC7Q9NXF8 308 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 FBXW11Q9UKB1 542 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 TIMM13Q9Y5L4 95 aaPredicted RBP9.29□□□□□ -0.92
COL28A1-205ENST00000453441 HCFC2Q9Y5Z7 792 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 ATP8B3O60423 1300 aa9.29□□□□□ -0.92
COL28A1-205ENST00000453441 A8MXQ7 604 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 PES1O00541 588 aaKnown RBP9.28□□□□□ -0.92
COL28A1-205ENST00000453441 TGM5O43548 720 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 CSPG5O95196 566 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 TUFMP49411 452 aaKnown RBP9.28□□□□□ -0.92
COL28A1-205ENST00000453441 MFAP3P55082 362 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 ITIH3Q06033 890 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 NNTQ13423 1086 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 ARID5BQ14865 1188 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 CFAP221Q4G0U5 840 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 ANKRD54Q6NXT1 300 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 RBM23Q86U06 439 aaKnown RBP9.28□□□□□ -0.92
COL28A1-205ENST00000453441 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 TCEAL8Q8IYN2 117 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 CRYBG2Q8N1P7 616 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 TMEM130Q8N3G9 435 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 KREMEN2Q8NCW0 462 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 IQCDQ96DY2 449 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 ERGIC2Q96RQ1 377 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 RTP3Q9BQQ7 232 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 SYT15Q9BQS2 421 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 MRPL45Q9BRJ2 306 aaKnown RBP9.28□□□□□ -0.92
COL28A1-205ENST00000453441 PI4K2AQ9BTU6 479 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 NT5C1AQ9BXI3 368 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 HSD3B7Q9H2F3 369 aa9.28□□□□□ -0.92
COL28A1-205ENST00000453441 SMYD3Q9H7B4 428 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms