RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 ZBTB18Q99592 522 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 DCLK3Q9C098 648 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 FBXO40Q9UH90 709 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 EML1O00423 815 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 PECAM1P16284 738 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 ADRA1DP25100 572 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 DSG1Q02413 1049 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CENPCQ03188 943 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 ELOA2Q8IYF1 753 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 DDX50Q9BQ39 737 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 E9PCH4 1651 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CDC42BPBQ9Y5S2 1711 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 CYTH3O43739 400 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 CPB1P15086 417 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 FLOT2Q14254 428 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 EFCAB12Q6NXP0 572 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 FBXO16Q8IX29 292 aaPredicted RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 RIN3Q8TB24 985 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 MARK4Q96L34 752 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 SEMA6AQ9H2E6 1030 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 IARS2Q9NSE4 1012 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 HERC5Q9UII4 1024 aaKnown RBP8.08□□□□□ -1.12
RIF1-206ENST00000453091 GTF3C4Q9UKN8 822 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 TBX20Q9UMR3 447 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 SIK3Q9Y2K2 1263 aa8.08□□□□□ -1.12
RIF1-206ENST00000453091 RFX1P22670 979 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 AARSP49588 968 aaKnown RBP eCLIP8.07□□□□□ -1.12
RIF1-206ENST00000453091 TTLL4Q14679 1199 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 DNAL1Q4LDG9 190 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SYDE1Q6ZW31 735 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 FUKQ8N0W3 1084 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 CNPY4Q8N129 248 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 NKX2-3Q8TAU0 364 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SLC7A14Q8TBB6 771 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SNX19Q92543 992 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 USP6NLQ92738 828 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 CATSPER2Q96P56 530 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 KIF17Q9P2E2 1029 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 PAMP19021 973 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 VCAM1P19320 739 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 NPNTQ6UXI9 565 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 GANCQ8TET4 914 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 ACSS2Q9NR19 701 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 TIMM13Q9Y5L4 95 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 E5RI56 91 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 GFAPP14136 432 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 KCNA4P22459 653 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 CUL2Q13617 745 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 KPNB1Q14974 876 aaKnown RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 C6orf10Q5SRN2 563 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SCG3Q8WXD2 468 aaKnown RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 ULK4Q96C45 1275 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 PABPC5Q96DU9 382 aaKnown RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 ZBED2Q9BTP6 218 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 CARD9Q9H257 536 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 PCDHB2Q9Y5E7 798 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SNX13Q9Y5W8 968 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 MAGEA13PA6NCF6 341 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 FAM86B1E9PN63 330 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 RARGP13631 454 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SH3RF1Q7Z6J0 888 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 TMEM139Q8IV31 216 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 ZSCAN18Q8TBC5 510 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 GOLGA8TH3BQL2 631 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 TNFAIP2Q03169 654 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 LY6KQ17RY6 165 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 NT5DC3Q86UY8 548 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 ARHGAP18Q8N392 663 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 TCP10LQ8TDR4 215 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 OLFML3Q9NRN5 406 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SLC12A6Q9UHW9 1150 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 CDYLQ9Y232 598 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 CDC42BPAQ5VT25 1732 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 SUPT3HB4E1H0 165 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 KLRC4O43908 158 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 ENDOD1O94919 500 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 C6orf222P0C671 652 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 NELFEP18615 380 aaKnown RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 NPTX2P47972 431 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 RASA2Q15283 850 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 OASLQ15646 514 aaKnown RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 SCUBE1Q8IWY4 988 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 TRPC7Q9HCX4 862 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.07□□□□□ -1.12
RIF1-206ENST00000453091 ARHGAP10A1A4S6 786 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 ANGPT2O15123 496 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 RPA3P35244 121 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 CLEC4FQ8N1N0 589 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 PTPRN2Q92932 1015 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 ZBTB45Q96K62 511 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 MOV10L1Q9BXT6 1211 aaKnown RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 GCOM2Q9BZD3 368 aaPredicted RBP8.07□□□□□ -1.12
RIF1-206ENST00000453091 ARHGEF38Q9NXL2 777 aa8.07□□□□□ -1.12
RIF1-206ENST00000453091 C2orf71A6NGG8 1288 aa8.06□□□□□ -1.12
RIF1-206ENST00000453091 DCAF6Q58WW2 860 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms