RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ACE2Q9BYF1 805 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 FTOQ9C0B1 505 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ASCC2Q9H1I8 757 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 C1orf21Q9H246 121 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 GPRC5CQ9NQ84 441 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 ACSS2Q9NR19 701 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 CNNM1Q9NRU3 951 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 RXFP3Q9NSD7 469 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TAB2Q9NYJ8 693 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 UBA2Q9UBT2 640 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 MORF4L1Q9UBU8 362 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 SUN2Q9UH99 717 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 AFF4Q9UHB7 1163 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 DPP7Q9UHL4 492 aa4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMEFF2Q9UIK5 374 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 CFAP20Q9Y6A4 193 aaKnown RBP4.79□□□□□ -1.64
HMGB3P21-201ENST00000452483 AGAP14A8MT82 685 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 A8MVJ9 347 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 H3BNC9 293 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNK3O14649 394 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 RRP9O43818 475 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PRPSAP2O60256 369 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 NOL3O60936 208 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 TBX10O75333 385 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PALMO75781 387 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 RPLP2P05387 115 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 HEXBP07686 556 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMIGD3P0DMS9 266 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CYP2A6P11509 494 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 LCP1P13796 627 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 GRK3P35626 688 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 MATR3P43243 847 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNF41P51814 821 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 MANFP55145 182 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 JAM2P57087 298 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CCT2P78371 535 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CDK17Q00537 523 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ACTN3Q08043 901 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 GALNT2Q10471 571 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNAB2Q13303 367 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 SMAD4Q13485 552 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 SNW1Q13573 536 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 NFE2L1Q14494 772 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PUM1Q14671 1186 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ACAP1Q15027 740 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 GPR68Q15743 365 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 SHROOM1Q2M3G4 852 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 C3orf38Q5JPI3 329 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PITRM1Q5JRX3 1037 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 TTC39AQ5SRH9 613 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 C10orf76Q5T2E6 689 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 OGFOD2Q6N063 350 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KLHDC10Q6PID8 442 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 SLC30A9Q6PML9 568 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 BBS12Q6ZW61 710 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PLEKHM3Q6ZWE6 761 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 MIGA2Q7L4E1 593 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMC3Q7Z5M5 1100 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 TMEM110Q86TL2 294 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 OSTM1Q86WC4 334 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ADSSL1Q8N142 457 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 SH2D3CQ8N5H7 860 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 OR52K2Q8NGK3 314 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CYP2W1Q8TAV3 490 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KIAA1524Q8TCG1 905 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 DEPDC1BQ8WUY9 529 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZFAND2BQ8WV99 257 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 SHC3Q92529 594 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PTP4A1Q93096 173 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ITFG2Q969R8 447 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 VPS33AQ96AX1 596 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CHFRQ96EP1 664 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CDCA5Q96FF9 252 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 NEIL1Q96FI4 390 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KIRREL1Q96J84 757 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 FAM210AQ96ND0 272 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 KCNJ15Q99712 375 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 THUMPD3Q9BV44 507 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 NDST4Q9H3R1 872 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 LMBRD1Q9NUN5 540 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 ZNHIT6Q9NWK9 470 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 CGNQ9P2M7 1197 aaKnown RBP4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PSAT1Q9Y617 370 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PIAS3Q9Y6X2 628 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 PIK3R4Q99570 1358 aa4.78□□□□□ -1.64
HMGB3P21-201ENST00000452483 LMTK3Q96Q04 1460 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 H0YAE9 185 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF561-AS1K7EIQ3 104 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 UBXN8O00124 270 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CACNB4O00305 520 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 FCHO1O14526 889 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 RIPK2O43353 540 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 ACTL6BO94805 426 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 NDST3O95803 873 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 TK1P04183 234 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms