RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PABPC1LQ4VXU2 614 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 DPY19L2P1Q6NXN4 242 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 FOXR2Q6PJQ5 311 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 LNX2Q8N448 690 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 SLC44A3Q8N4M1 653 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 IL17RDQ8NFM7 739 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 COA7Q96BR5 231 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 TMX3Q96JJ7 454 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 MRGPRX4Q96LA9 322 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 BBC3Q96PG8 261 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 SIN3AQ96ST3 1273 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 CCDC8Q9H0W5 538 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 PRDM13Q9H4Q3 707 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 UNKLQ9H9P5 680 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 TBCCD1Q9NVR7 557 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 TESQ9UGI8 421 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 PCDHA13Q9Y5I0 950 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 SLIT3O75094 1523 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 C5P01031 1676 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 QRICH2Q9H0J4 1663 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 PASKQ96RG2 1323 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 SALL3Q9BXA9 1300 aa5.46□□□□□ -1.54
GTF3C3-207ENST00000451088 GRM6O15303 877 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 ERN1O75460 977 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 SBK3P0C264 359 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 MTHFD1P11586 935 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 FCER1AP12319 257 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 TMF1P82094 1093 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 ITKQ08881 620 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 PCBP2Q15366 365 aaKnown RBP eCLIP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 C3orf36Q3SXR2 165 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 STRIP1Q5VSL9 837 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 Q6ZNX1 250 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 RSPH3Q86UC2 560 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 SIMC1Q8NDZ2 872 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 ZCRB1Q8TBF4 217 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 TBC1D15Q8TC07 691 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 RAB24Q969Q5 203 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 TEKT5Q96M29 485 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 DMRTA2Q96SC8 542 aa5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 MTO1Q9Y2Z2 717 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 POLR2AP24928 1970 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-207ENST00000451088 ALG1L2C9J202 215 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 CEP290O15078 2479 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 XPOTO43592 962 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 KATNA1O75449 491 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 IL10RAQ13651 578 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 RAB39AQ14964 217 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 ERCC6LQ2NKX8 1250 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 SP5Q6BEB4 398 aaPredicted RBP5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 EDC4Q6P2E9 1401 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 ADGRG3Q86Y34 549 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 COLGALT2Q8IYK4 626 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 FAM98AQ8NCA5 519 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 GCC1Q96CN9 775 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 ZNF764Q96H86 408 aaPredicted RBP5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 SLC13A1Q9BZW2 595 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 CALCOCO1Q9P1Z2 691 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 INSL6Q9Y581 213 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 PCDHB1Q9Y5F3 818 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 MRFAP1Q9Y605 127 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 COX11Q9Y6N1 276 aa5.44□□□□□ -1.54
GTF3C3-207ENST00000451088 TRIOBPQ9H2D6 2365 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 COL11A2P13942 1736 aaPredicted RBP5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 CCDC154A6NI56 674 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 SLC43A1O75387 559 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 CHRNA5P30532 468 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 CXCR5P32302 372 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 PLA2G5P39877 138 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 SOX10P56693 466 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 ZNF280AP59817 542 aaPredicted RBP5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 TLE1Q04724 770 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 ZNF169Q14929 603 aaPredicted RBP5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 GEN1Q17RS7 908 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 MTMR8Q96EF0 704 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 PTCD3Q96EY7 689 aaKnown RBP5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 COG3Q96JB2 828 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 R3HDMLQ9H3Y0 253 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 CASS4Q9NQ75 786 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 KCTD5Q9NXV2 234 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 VSX1Q9NZR4 365 aaPredicted RBP5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 JKAMPQ9P055 326 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 FOXJ2Q9P0K8 574 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 SERPINB13Q9UIV8 391 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 C4BP0C0L5 1744 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 DOT1LQ8TEK3 1739 aa5.43□□□□□ -1.54
GTF3C3-207ENST00000451088 KDM6AO15550 1401 aaPredicted RBP5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 A0A1W2PS29 197 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 AGFG2O95081 481 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 ADKP55263 362 aaKnown RBP5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 KIF23Q02241 960 aaPredicted RBP5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 ODF1Q14990 250 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 FLYWCH1Q4VC44 716 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 PPP4R3AQ6IN85 833 aa5.42□□□□□ -1.54
GTF3C3-207ENST00000451088 ZNF365Q70YC5 407 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms