RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MDH1P40925 334 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SPIRE1Q08AE8 756 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 OASLQ15646 514 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 TTC39BQ5VTQ0 682 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 OTOAQ7RTW8 1153 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SPIRE2Q8WWL2 714 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 POP5Q969H6 163 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ZSCAN10Q96SZ4 725 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 RAB23Q9ULC3 237 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 INSRP06213 1382 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SERPINA1P01009 418 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 RPS2P15880 293 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 DCKP27707 260 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 PTGS2P35354 604 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF200P98182 395 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 PSMD5Q16401 504 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 GIT1Q9Y2X7 761 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 KLRF2D3W0D1 207 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF432O94892 652 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ATG7O95352 703 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 POLBP06746 335 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 NR3C2P08235 984 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 FGRP09769 529 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 TCN1P20061 433 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 AGAP9Q5VTM2 703 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 NEDD4LQ96PU5 975 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 TMEM79Q9BSE2 394 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ELOVL6Q9H5J4 265 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 NCOA2Q15596 1464 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SLCO1B7G3V0H7 640 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 FASP25445 335 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 NFIAQ12857 509 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 MEA1Q16626 185 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 TRMT5Q32P41 509 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 MIGA2Q7L4E1 593 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 KIAA0825Q8IV33 1275 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 S100PBPQ96BU1 408 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF333Q96JL9 665 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 H0YJX3 145 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 PALMO75781 387 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 APRTP07741 180 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SLC1A1P43005 524 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ALDH1A3P47895 512 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 PSMC5P62195 406 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 RPS8P62241 208 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 LPIN2Q92539 896 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 CST11Q9H112 138 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 DNAJC11Q9NVH1 559 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 A0A087WXM4 84 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 MGAT4DA6NG13 374 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ALOX5P09917 674 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ATF4P18848 351 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ZAP70P43403 619 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 CDK17Q00537 523 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 POLA2Q14181 598 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 PPM1LQ5SGD2 360 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 INTS11Q5TA45 600 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 GALNT18Q6P9A2 607 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 CCDC86Q9H6F5 360 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 L1RE1Q9UN81 338 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 MED23Q9ULK4 1368 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 LSM1O15116 133 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 NUDT2P50583 147 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 TRAF2Q12933 501 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 EIF5AL1Q6IS14 154 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 ZBTB49Q6ZSB9 765 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 CXXC5Q7LFL8 322 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 C10orf107Q8IVU9 208 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 LARGE2Q8N3Y3 721 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 CKAP2Q8WWK9 683 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 NMD3Q96D46 503 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF285Q96NJ3 590 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 TSPAN18Q96SJ8 248 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 TFCP2L1Q9NZI6 479 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 H0YIN7 160 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 GATBO75879 557 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 IGHDP01880 384 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 PDGFRBP09619 1106 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 CAPGP40121 348 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 EIF4A1P60842 406 aaKnown RBP9.25□□□□□ -0.93
NIPBL-202ENST00000448238 XIAPP98170 497 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 XRCC4Q13426 336 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 GPALPP1Q8IXQ4 340 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 CAMKK1Q8N5S9 505 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 ATL2Q8NHH9 583 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 SLC6A15Q9H2J7 730 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 SNAPC5O75971 98 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 SASH3O75995 380 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 PDHA2P29803 388 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 NT5C2P49902 561 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 NDUFA8P51970 172 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 AADACL4Q5VUY2 407 aa9.25□□□□□ -0.93
NIPBL-202ENST00000448238 LINC00523Q86TU6 105 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms