RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TMEM74BQ9NUR3 256 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 NYAP2Q9P242 653 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 GGT7Q9UJ14 662 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 GPR160Q9UJ42 338 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 APOBEC2Q9Y235 224 aaKnown RBP5.76□□□□□ -1.49
SDCBP-205ENST00000447267 MRVI1Q9Y6F6 885 aa5.76□□□□□ -1.49
SDCBP-205ENST00000447267 ZFP37Q9Y6Q3 630 aaPredicted RBP5.76□□□□□ -1.49
SDCBP-205ENST00000447267 MYO5AQ9Y4I1 1855 aaKnown RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 C2orf16Q68DN1 1984 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 B4E1Z4 1266 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 SUV39H1O43463 412 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 OPHN1O60890 802 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 AKAP3O75969 853 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 PRAMEF1O95521 474 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 GGPS1O95749 300 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 UQCRFS1P1P0C7P4 283 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 MCCP23508 829 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 ZNF76P36508 570 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 DHPSP49366 369 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 DLG4P78352 724 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 FAM189BP81408 668 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 SP2Q02086 613 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 TLE1Q04724 770 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 CELF3Q5SZQ8 465 aaKnown RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 UTP14CQ5TAP6 766 aaKnown RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 RNF111Q6ZNA4 994 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 NLRC3Q7RTR2 1065 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 RSPH3Q86UC2 560 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 SIRT2Q8IXJ6 389 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 LRRC43Q8N309 656 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 ANKS4BQ8N8V4 417 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 EXD3Q8N9H8 876 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 RNF169Q8NCN4 708 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 DNERQ8NFT8 737 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 ZSCAN18Q8TBC5 510 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 CHURC1Q8WUH1 139 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 KCNN1Q92952 543 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 MCRS1Q96EZ8 462 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 NAF1Q96HR8 494 aaKnown RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 MAP6Q96JE9 813 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 PLCD4Q9BRC7 762 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 NUSAP1Q9BXS6 441 aaKnown RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 RHOBTB2Q9BYZ6 727 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 SLC6A17Q9H1V8 727 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 ZNF552Q9H707 407 aaPredicted RBP5.75□□□□□ -1.49
SDCBP-205ENST00000447267 BRD9Q9H8M2 597 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 RGS18Q9NS28 235 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 TMEM161AQ9NX61 479 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 F8P00451 2351 aa5.75□□□□□ -1.49
SDCBP-205ENST00000447267 MGAQ8IWI9 3026 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 LAMA4Q16363 1823 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TCAF2A6NFQ2 919 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TEX28O15482 410 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 VAMP4O75379 141 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ICAM1P05362 532 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 SYPP08247 313 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ATXN1LP0C7T5 689 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 HLA-EP13747 358 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 BCKDHBP21953 392 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 RPL10P27635 214 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 CTSKP43235 329 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 POLGP54098 1239 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ATXN3P54252 364 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 AK2P54819 239 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 RNASELQ05823 741 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 HNRNPDQ14103 355 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 LRRC32Q14392 662 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 C2orf27AQ580R0 203 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 CLLU1OSQ5K130 101 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TTC39AQ5SRH9 613 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 KIAA1614Q5VZ46 1190 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TAF2Q6P1X5 1199 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TTLL10Q6ZVT0 673 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 C16orf86Q6ZW13 317 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TAS1R1Q7RTX1 841 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 FAM160B2Q86V87 743 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 RPAP2Q8IXW5 612 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 FAM26EQ8N5C1 309 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TTC8Q8TAM2 541 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ENOX1Q8TC92 643 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 DNASE1L2Q92874 299 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 IGSF21Q96ID5 467 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 CRNKL1Q9BZJ0 848 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ZNF334Q9HCZ1 680 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 CHST12Q9NRB3 414 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 EVLQ9UI08 416 aaPredicted RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 TCFL5Q9UL49 500 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 SLC8A2Q9UPR5 921 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 NOC2LQ9Y3T9 749 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ATG2BQ96BY7 2078 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 UTP20O75691 2785 aaKnown RBP5.74□□□□□ -1.49
SDCBP-205ENST00000447267 ITPR2Q14571 2701 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 F5P12259 2224 aa5.74□□□□□ -1.49
SDCBP-205ENST00000447267 LRRK2Q5S007 2527 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 ABCA2Q9BZC7 2435 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CCDC163A0A0D9SF12 145 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 MEIS3P2A8K0S8 358 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 APAF1O14727 1248 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 SHOXO15266 292 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 SIGLEC6O43699 453 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms