RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
ERBB2-203ENST00000445658 CNMDO75829 334 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 HLA-DRAP01903 254 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 CFHP08603 1231 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 WEE2P0C1S8 567 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 GLRA2P23416 452 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 SIX1Q15475 284 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ERO1BQ86YB8 467 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 FBXL18Q96ME1 805 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 RPS6KC1Q96S38 1066 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 FAM49AQ9H0Q0 323 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ATP4AP20648 1035 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 EPHX2P34913 555 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 SLC1A5Q15758 541 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 GALNTL6Q49A17 601 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 BRDTQ58F21 947 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ZC3H18Q86VM9 953 aaKnown RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ANKRD13AQ8IZ07 590 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 DDX50Q9BQ39 737 aaKnown RBP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 TRAIPQ9BWF2 469 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 APOL6Q9BWW8 343 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ZFATQ9P243 1243 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 MAP3K13O43283 966 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ZNF286BP0CG31 522 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 KRT4P19013 534 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 CYP24A1Q07973 514 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 TRPC3Q13507 836 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 MOGSQ13724 837 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 EFTUD2Q15029 972 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■□ 24.1
ERBB2-203ENST00000445658 MTFR1Q15390 333 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 LVRNQ6Q4G3 990 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 ISLR2Q6UXK2 745 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 LMNTD2Q8IXW0 634 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 VPS52Q8N1B4 723 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 OR5B17Q8NGF7 314 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 UCMAQ8WVF2 138 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 MAGEB18Q96M61 343 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 CYTH2Q99418 400 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERBB2-203ENST00000445658 NEU2Q9Y3R4 380 aa13.13□□□□□ -0.31
ERBB2-203ENST00000445658 TP73O15350 636 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 SMNDC1O75940 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 RFC5P40937 340 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 NSFP46459 744 aaKnown RBP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 PTDSS1P48651 473 aaKnown RBP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 ARSEP51690 589 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 PPIL2Q13356 520 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 TBC1D25Q3MII6 688 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 RNF220Q5VTB9 566 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 PPP1R21Q6ZMI0 780 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 MCUR1Q96AQ8 359 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 NIFKQ9BYG3 293 aaKnown RBP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 ARMCX1Q9P291 453 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 UMODL1Q5DID0 1318 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 ZSWIM8A7E2V4 1837 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 LRRD1A4D1F6 860 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 SGK1O00141 431 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 B4GALT5O43286 388 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 TCF4P15884 667 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 TAS2R40P59535 323 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 GAD2Q05329 585 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 MAB21L3Q8N8X9 362 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 MTMR12Q9C0I1 747 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 DENND2DQ9H6A0 471 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-203ENST00000445658 BATF3Q9NR55 127 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 AGTPBP1Q9UPW5 1226 aa13.12□□□□□ -0.31
ERBB2-203ENST00000445658 H0YCG3 227 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 ADRA1DP25100 572 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 RCN2Q14257 317 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 LRRC36Q1X8D7 754 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 FAM160B1Q5W0V3 765 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 OSBPL8Q9BZF1 889 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 FBXO6Q9NRD1 293 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-203ENST00000445658 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 NOCTQ9UK39 431 aaKnown RBP13.11□□□□□ -0.31
ERBB2-203ENST00000445658 GRID1Q9ULK0 1009 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 BAG2O95816 211 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 VTNP04004 478 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 KITP10721 976 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 GNAT1P11488 350 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 SSTR1P30872 391 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 TMEM121Q9BTD3 319 aa13.11□□□□□ -0.31
ERBB2-203ENST00000445658 RNPEPL1Q9HAU8 725 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms