RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 IL31RAQ8NI17 732 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 RPRD1AQ96P16 312 aaPredicted RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 GPBP1L1Q9HC44 474 aaPredicted RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 BUD23O43709 281 aaKnown RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.071e-7■□□□□ 8.5
RIF1-205ENST00000444746 ITIH2P19823 946 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 SERPINB5P36952 375 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 RFC5P40937 340 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 EDRF1Q3B7T1 1238 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 FSCBQ5H9T9 825 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 DNAJC7Q99615 494 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 UPF3AQ9H1J1 476 aaKnown RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 SUFUQ9UMX1 484 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 TMX2Q9Y320 296 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 B2RBV5 119 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 EIF3HO15372 352 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■■■□□ 15.4
RIF1-205ENST00000444746 CETPP11597 493 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 SKIP12755 728 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 KRT4P19013 534 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 CAV1Q03135 178 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 STAT4Q14765 748 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 ECM1Q16610 540 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 ANKZF1Q9H8Y5 726 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 LATS2Q9NRM7 1088 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 MAP3K20Q9NYL2 800 aaKnown RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 HAO1Q9UJM8 370 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 EIF3DO15371 548 aaKnown RBP eCLIP8.34□□□□□ -1.07
RIF1-205ENST00000444746 TNFSF9P41273 254 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 RABGAP1LQ5R372 815 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 SV2AQ7L0J3 742 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 CTNNAL1Q9UBT7 734 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 DIP2BQ9P265 1576 aa8.34□□□□□ -1.08
RIF1-205ENST00000444746 IGF2BP3O00425 579 aaKnown RBP eCLIP8.33□□□□□ -1.08
RIF1-205ENST00000444746 USP12O75317 370 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 GHRP10912 638 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 LSP1P33241 339 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 NNMTP40261 264 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 TAF6P49848 677 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 CYP24A1Q07973 514 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 SV2CQ496J9 727 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 SYTL3Q4VX76 610 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 YAF2Q8IY57 180 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 CHST13Q8NET6 341 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 SCFD2Q8WU76 684 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 FICDQ9BVA6 458 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 FGFBP2Q9BYJ0 223 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 PDGFDQ9GZP0 370 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 WDCPQ9H6R7 721 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 CISHQ9NSE2 258 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 KBTBD4Q9NVX7 518 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 SLC13A4Q9UKG4 626 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 ATP11BQ9Y2G3 1177 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 PFASO15067 1338 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 HOXD10P28358 340 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 IRAK1P51617 712 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 SDHAF4Q5VUM1 108 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 PRPF39Q86UA1 669 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 SCUBE3Q8IX30 993 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 WDR48Q8TAF3 677 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 ERGIC2Q96RQ1 377 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 ISCUQ9H1K1 167 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 PSMC3IPQ9P2W1 217 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 RUVBL2Q9Y230 463 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 PKP3Q9Y446 797 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 ARHGEF37A1IGU5 675 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 RHOBTB1O94844 696 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 LUC7L3O95232 432 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 BGNP21810 368 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 RFX3P48380 749 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 TRAPPC11Q7Z392 1133 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 PLEKHH3Q7Z736 793 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 RXFP2Q8WXD0 754 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 EFHD1Q9BUP0 239 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 CHST12Q9NRB3 414 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 SPATA31A6Q5VVP1 1343 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 A0A1W2PQJ5 194 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 H0Y626 953 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 ASAP2O43150 1006 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 HMOX2P30519 316 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 RPL10AP62906 217 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 CRADDP78560 199 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 PIGHQ14442 188 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 FBXO25Q8TCJ0 367 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 UTP6Q9NYH9 597 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 TRDMT1O14717 391 aaKnown RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 NDUFS3O75489 264 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 RABGGTBP53611 331 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 AP3M2P53677 418 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 FBXW4P57775 412 aa8.33□□□□□ -1.08
RIF1-205ENST00000444746 CCDC85BQ15834 202 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 PTAR1Q7Z6K3 402 aaPredicted RBP8.33□□□□□ -1.08
RIF1-205ENST00000444746 ADGRF2Q8IZF7 708 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms