RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 GKAP1Q5VSY0 366 aaPredicted RBP23.52■■□□□ 1.36
PREB-206ENST00000444452 CPLX4Q7Z7G2 160 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 PRUNE1Q86TP1 453 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 TTC39CQ8N584 583 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 GLIS1Q8NBF1 620 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 ARHGEF2Q92974 986 aaKnown RBP23.52■■□□□ 1.36
PREB-206ENST00000444452 MCRS1Q96EZ8 462 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 HPDLQ96IR7 371 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 SEC16BQ96JE7 1060 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 RBM15Q96T37 977 aaKnown RBP eCLIP23.52■■□□□ 1.36
PREB-206ENST00000444452 TUT1Q9H6E5 874 aaKnown RBP23.52■■□□□ 1.36
PREB-206ENST00000444452 SYNCQ9H7C4 482 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 LGALS13Q9UHV8 139 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 ORC1Q13415 861 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 STAT4Q14765 748 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 NLRP7Q8WX94 980 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 PCDH9Q9HC56 1237 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 METTL5Q9NRN9 209 aaKnown RBP23.52■■□□□ 1.36
PREB-206ENST00000444452 MORF4L1Q9UBU8 362 aa23.52■■□□□ 1.36
PREB-206ENST00000444452 TPX2Q9ULW0 747 aaKnown RBP23.52■■□□□ 1.36
PREB-206ENST00000444452 A0A1B0GUA9 196 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 CETPP11597 493 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 HOXD8P13378 290 aaPredicted RBP23.51■■□□□ 1.35
PREB-206ENST00000444452 IL1R2P27930 398 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 GPD2P43304 727 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 MORF4L2Q15014 288 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 KIAA0319LQ8IZA0 1049 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 CACNA2D3Q8IZS8 1091 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 TMEM130Q8N3G9 435 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 BARX2Q9UMQ3 279 aaPredicted RBP23.51■■□□□ 1.35
PREB-206ENST00000444452 AGAP1Q9UPQ3 857 aa23.51■■□□□ 1.35
PREB-206ENST00000444452 SNAI1O95863 264 aaPredicted RBP23.5■■□□□ 1.35
PREB-206ENST00000444452 ITGBL1O95965 494 aaPredicted RBP23.5■■□□□ 1.35
PREB-206ENST00000444452 MAGEA4P43358 317 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 GCLCP48506 637 aaPredicted RBP23.5■■□□□ 1.35
PREB-206ENST00000444452 RBP5P82980 135 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 CCDC38Q502W7 563 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 ZNF410Q86VK4 478 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 TTC13Q8NBP0 860 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 ACAP3Q96P50 834 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 CCDC77Q9BR77 488 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 ADPGKQ9BRR6 497 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 M0QYV0 167 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 CDH16O75309 829 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 IFT88Q13099 833 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 BBS12Q6ZW61 710 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 MS4A4AQ96JQ5 239 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 ZWILCHQ9H900 591 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 KIAA1257Q9ULG3 409 aa23.5■■□□□ 1.35
PREB-206ENST00000444452 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.49■■□□□ 1.35
PREB-206ENST00000444452 ZSCAN5DPP0CG00 497 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 KDELR1P24390 212 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 LIG3P49916 1009 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 SLC20A2Q08357 652 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 GPS1Q13098 491 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 GRIK4Q16099 956 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 MARCH8Q5T0T0 291 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 EMC1Q8N766 993 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.352e-9■■■■■ 28.4
PREB-206ENST00000444452 CABS1Q96KC9 395 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 C9orf72Q96LT7 481 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 TTC25Q96NG3 672 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 SYT17Q9BSW7 474 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 DPP3Q9NY33 737 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 SHOC2Q9UQ13 582 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 BTBD19C9JJ37 291 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 GRM5P41594 1212 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 SMTNL2Q2TAL5 461 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 RIBC1Q8N443 379 aaPredicted RBP23.49■■□□□ 1.35
PREB-206ENST00000444452 HAUS1Q96CS2 278 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 HEXIM2Q96MH2 286 aaKnown RBP23.49■■□□□ 1.35
PREB-206ENST00000444452 CFAP57Q96MR6 1250 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 PRMT1Q99873 361 aaKnown RBP23.49■■□□□ 1.35
PREB-206ENST00000444452 EURLQ9NYK6 297 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 CTNNAL1Q9UBT7 734 aa23.49■■□□□ 1.35
PREB-206ENST00000444452 GTF2A2P52657 109 aa23.48■■□□□ 1.35
PREB-206ENST00000444452 CCDC142Q17RM4 750 aa23.48■■□□□ 1.35
PREB-206ENST00000444452 DUSP28Q4G0W2 176 aa23.48■■□□□ 1.35
PREB-206ENST00000444452 RNASEH2BQ5TBB1 312 aaKnown RBP23.48■■□□□ 1.35
PREB-206ENST00000444452 VSTM1Q6UX27 236 aa23.48■■□□□ 1.35
PREB-206ENST00000444452 TMEM121Q9BTD3 319 aa23.48■■□□□ 1.35
PREB-206ENST00000444452 ACTL7BQ9Y614 415 aa23.48■■□□□ 1.35
PREB-206ENST00000444452 RNF8O76064 485 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 FSBPO95073 299 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 MMP3P08254 477 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 ETS1P14921 441 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 PECAM1P16284 738 aaPredicted RBP23.47■■□□□ 1.35
PREB-206ENST00000444452 NDST1P52848 882 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 PLCB3Q01970 1234 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 MYO1EQ12965 1108 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 KCNT1Q5JUK3 1230 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 MAP1SQ66K74 1059 aaPredicted RBP23.47■■□□□ 1.35
PREB-206ENST00000444452 LCLAT1Q6UWP7 414 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 MICALL1Q8N3F8 863 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 CMASQ8NFW8 434 aaPredicted RBP23.47■■□□□ 1.35
PREB-206ENST00000444452 ACTL9Q8TC94 416 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 MIS12Q9H081 205 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 TMEM120BA0PK00 339 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 SGK1O00141 431 aa23.47■■□□□ 1.35
PREB-206ENST00000444452 CST8O60676 142 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms