RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 PRPF39Q86UA1 669 aaKnown RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ZCCHC9Q8N567 271 aaKnown RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 SCG3Q8WXD2 468 aaKnown RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 NSL1Q96IY1 281 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 IDI2Q9BXS1 227 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 TXLNGYQ9BZA5 131 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CYP26B1Q9NR63 512 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ZC3H7BQ9UGR2 993 aaKnown RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 DPPA5A6NC42 116 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 LIASO43766 372 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 KRT37O76014 449 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CALB1P05937 261 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 GLRA2P23416 452 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 GPC3P51654 580 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ZNF200P98182 395 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 PGM5Q15124 567 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 RNF220Q5VTB9 566 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CRLF3Q8IUI8 442 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CCDC60Q8IWA6 550 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 NDUFAF2Q8N183 169 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 DEPDC1BQ8WUY9 529 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ZNF395Q9H8N7 513 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CISHQ9NSE2 258 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 SPECC1L-ADORA2AF8WAN1 911 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 EXTL3O43909 919 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CD48P09326 243 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 PTPN4P29074 926 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 SFNP31947 248 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 SLC8A3P57103 927 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ZNF568Q3ZCX4 644 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 SPDYCQ5MJ68 293 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 CERKQ8TCT0 537 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 VPS11Q9H270 941 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 ZNF302Q9NR11 478 aa12.19□□□□□ -0.46
HCFC1-203ENST00000444191 PSTPIP1O43586 416 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 VCPP55072 806 aaKnown RBP12.18□□□□□ -0.46
HCFC1-203ENST00000444191 ROR1Q01973 937 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 ZNF667Q5HYK9 610 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 ZBTB8OSQ8IWT0 167 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 FAM151AQ8WW52 585 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 TJP2Q9UDY2 1190 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 SLC4A7Q9Y6M7 1214 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 IRS2Q9Y4H2 1338 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 SPDYE2BA6NHP3 402 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 FCHO1O14526 889 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 EDF1O60869 148 aaKnown RBP12.18□□□□□ -0.46
HCFC1-203ENST00000444191 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-203ENST00000444191 SPDYE6P0CI01 402 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 AQP5P55064 265 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 GDF10P55107 478 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 BCAR1P56945 870 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 RASA2Q15283 850 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 RABGAP1LQ5R372 815 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 PCGF5Q86SE9 256 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 MAP4K3Q8IVH8 894 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
HCFC1-203ENST00000444191 UCMAQ8WVF2 138 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 AGAP3Q96P47 875 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 ARHGEF3Q9NR81 526 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 RIPK3Q9Y572 518 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
HCFC1-203ENST00000444191 BCORQ6W2J9 1755 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 USP1O94782 785 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 PDGFRAP16234 1089 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 CRADDP78560 199 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 TAF5Q15542 800 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 TRIM50Q86XT4 487 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 UNC45BQ8IWX7 931 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 PPIL6Q8IXY8 311 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 ZNF516Q92618 1163 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 FGD4Q96M96 766 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 SLITRK1Q96PX8 696 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 WRNIP1Q96S55 665 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 RANBP17Q9H2T7 1088 aaKnown RBP12.18□□□□□ -0.46
HCFC1-203ENST00000444191 ACSS2Q9NR19 701 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 SENP1Q9P0U3 644 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 POLIQ9UNA4 740 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
HCFC1-203ENST00000444191 PLCH1Q4KWH8 1693 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 CYB561D2O14569 222 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 ZWINTO95229 277 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 GJB1P08034 283 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 NOMO3P69849 1222 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 SIX1Q15475 284 aaPredicted RBP12.17□□□□□ -0.46
HCFC1-203ENST00000444191 FNBP1LQ5T0N5 605 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 IL31Q6EBC2 164 aa12.17□□□□□ -0.46
HCFC1-203ENST00000444191 SAMD7Q7Z3H4 446 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms