RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 SNX16P57768 344 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 LILRA4P59901 499 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 MCCD1P59942 119 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 ERVK-21P61565 698 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PTK2Q05397 1052 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 SMARCB1Q12824 385 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PLD1Q13393 1074 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 GPM6BQ13491 265 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 NAB2Q15742 525 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 ASIC2Q16515 512 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 NFE2Q16621 373 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 CTXN3Q4LDR2 81 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 C1orf220Q5T0J3 134 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PPP1R26Q5T8A7 1209 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 LIN9Q5TKA1 542 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 SPOPLQ6IQ16 392 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PPP1R2P3Q6NXS1 205 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 TMEM270Q6UE05 265 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 GAS2L3Q86XJ1 694 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 SPATA2LQ8IUW3 424 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 VSTM4Q8IW00 320 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 GPR65Q8IYL9 337 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 VPS52Q8N1B4 723 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 KLHL23Q8NBE8 558 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 RBBP8NLQ8NC74 664 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 IPO4Q8TEX9 1081 aaKnown RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 C2orf15Q8WU43 125 aaKnown RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 RIN2Q8WYP3 895 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PIK3R5Q8WYR1 880 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 NOX5Q96PH1 765 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 GAS2L1Q99501 681 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 TCF25Q9BQ70 676 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 SYT15Q9BQS2 421 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 MED10Q9BTT4 135 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PI4K2AQ9BTU6 479 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 C1QTNF2Q9BXJ5 285 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 BCO2Q9BYV7 579 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 HSD3B7Q9H2F3 369 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 DEF6Q9H4E7 631 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 SMYD3Q9H7B4 428 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 UBE2TQ9NPD8 197 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 NLRC4Q9NPP4 1024 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 CISHQ9NSE2 258 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 MARCH5Q9NX47 278 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 MIOSQ9NXC5 875 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 DDX43Q9NXZ2 648 aaKnown RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 IMPACTQ9P2X3 320 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 SIX4Q9UIU6 781 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 DNAJC12Q9UKB3 198 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 CDH9Q9ULB4 789 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 BARX2Q9UMQ3 279 aaPredicted RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 L1RE1Q9UN81 338 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 LUC7L2Q9Y383 392 aaKnown RBP5.3□□□□□ -1.56
CCDC140-202ENST00000440903 PCDHB4Q9Y5E5 795 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 TET1Q8NFU7 2136 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 CENPFP49454 3210 aa5.3□□□□□ -1.56
CCDC140-202ENST00000440903 ANK1P16157 1881 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 FNDC1Q4ZHG4 1894 aaPredicted RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 AKR1B15C9JRZ8 316 aaPredicted RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 F8VZ95 297 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 H3BNC9 293 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 I3L4J1 428 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 C2CD2LO14523 706 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 PPEF2O14830 753 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 MEFVO15553 781 aaPredicted RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 TEX33O43247 280 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 THAP12O43422 761 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 CILPO75339 1184 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 CSPG5O95196 566 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 GLUD1P00367 558 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 CST3P01034 146 aaPredicted RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 ITGB2P05107 769 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 PAEPP09466 180 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 WEE2P0C1S8 567 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 CTSAP10619 480 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 DESP17661 470 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 SLC9A1P19634 815 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 FGFR3P22607 806 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 ANXA13P27216 316 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 GNA15P30679 374 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 SOX5P35711 763 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 GNL1P36915 607 aaPredicted RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 CTSOP43234 321 aaPredicted RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 RAP1GAPP47736 663 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 ARPP19P56211 112 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 ZBED6P86452 979 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 RELBQ01201 579 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 DSG1Q02413 1049 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 TAP1Q03518 808 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 INCA1Q0VD86 236 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 CCDC173Q0VFZ6 552 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 NR1I3Q14994 352 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 VEPH1Q14D04 833 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 SGO2Q562F6 1265 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 INTS6LQ5JSJ4 861 aaKnown RBP5.29□□□□□ -1.56
CCDC140-202ENST00000440903 KLHDC7AQ5VTJ3 777 aa5.29□□□□□ -1.56
CCDC140-202ENST00000440903 SFMBT2Q5VUG0 894 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms