RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 PPP1R15BQ5SWA1 713 aa20.78■□□□□ 0.92
APTR-204ENST00000440088 DCLRE1AQ6PJP8 1040 aa20.78■□□□□ 0.92
APTR-204ENST00000440088 XYLT1Q86Y38 959 aa20.78■□□□□ 0.92
APTR-204ENST00000440088 GPR161Q8N6U8 529 aaKnown RBP20.78■□□□□ 0.92
APTR-204ENST00000440088 NOA1Q8NC60 698 aaKnown RBP20.78■□□□□ 0.92
APTR-204ENST00000440088 ALG3Q92685 438 aa20.78■□□□□ 0.92
APTR-204ENST00000440088 DDX43Q9NXZ2 648 aaKnown RBP20.78■□□□□ 0.92
APTR-204ENST00000440088 IP6K2Q9UHH9 426 aa20.78■□□□□ 0.92
APTR-204ENST00000440088 GJB6O95452 261 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 CXCL10P02778 98 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 CCDC130P13994 396 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 CTNNA2P26232 953 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 BCAT1P54687 386 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 RASGEF1CQ8N431 466 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 ANKRD52Q8NB46 1076 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 KRT35Q92764 455 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 LPIN3Q9BQK8 851 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 ATP11BQ9Y2G3 1177 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 SCN5AQ14524 2016 aa20.77■□□□□ 0.92
APTR-204ENST00000440088 SIGLEC16A6NMB1 481 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 GOLGA8SH3BPF8 625 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 PGRMC1O00264 195 aaKnown RBP20.77■□□□□ 0.91
APTR-204ENST00000440088 KRT3P12035 628 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 PTPN1P18031 435 aaKnown RBP20.77■□□□□ 0.91
APTR-204ENST00000440088 RNASELQ05823 741 aaKnown RBP20.77■□□□□ 0.91
APTR-204ENST00000440088 DSC1Q08554 894 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 PAN2Q504Q3 1202 aaKnown RBP20.77■□□□□ 0.91
APTR-204ENST00000440088 DCAF12L1Q5VU92 463 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 ABI1Q8IZP0 508 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 SPATA18Q8TC71 538 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 STK32AQ8WU08 396 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 SLC35F5Q8WV83 523 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.77■□□□□ 0.91
APTR-204ENST00000440088 TBC1D13Q9NVG8 400 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 PCDHA3Q9Y5H8 950 aa20.77■□□□□ 0.91
APTR-204ENST00000440088 TIMM13Q9Y5L4 95 aaPredicted RBP20.77■□□□□ 0.91
APTR-204ENST00000440088 ADORA2BP29275 332 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 CYP2C18P33260 490 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 MAN1A1P33908 653 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 PEX5P50542 639 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 SNX16P57768 344 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 RNASE9P60153 205 aaKnown RBP20.76■□□□□ 0.91
APTR-204ENST00000440088 C2orf54Q08AI8 447 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 BST2Q10589 180 aaKnown RBP20.76■□□□□ 0.91
APTR-204ENST00000440088 PMF1Q6P1K2 205 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 ZNF280BQ86YH2 543 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 CPNE8Q86YQ8 564 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 SLC2A14Q8TDB8 520 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 DSEQ9UL01 958 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 LRFN2Q9ULH4 789 aa20.76■□□□□ 0.91
APTR-204ENST00000440088 KIAA0100Q14667 2235 aaKnown RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 ARHGEF37A1IGU5 675 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 M0QZQ0 153 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 DDHD2O94830 711 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 ACAT1P24752 427 aaKnown RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 BRCC3P46736 316 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 MARCKSL1P49006 195 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 PDE4CQ08493 712 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 CD300LGQ6UXG3 332 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 HASPINQ8TF76 798 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 MCRS1Q96EZ8 462 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 FAM193BQ96PV7 902 aaPredicted RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 HNRNPABQ99729 332 aaKnown RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 TBX21Q9UL17 535 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 TTC7AQ9ULT0 858 aaPredicted RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 TTC3P53804 2025 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 E5RJQ4 531 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 ATP2C2O75185 946 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 CAPN15O75808 1086 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 CYP11A1P05108 521 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 PCSK1P29120 753 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 CTCFP49711 727 aaPredicted RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 RWDD2BP57060 319 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 METTL23Q86XA0 190 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 RSPH1Q8WYR4 309 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 ANKRD7Q92527 254 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 PAWRQ96IZ0 340 aaKnown RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 RNPC3Q96LT9 517 aaKnown RBP20.75■□□□□ 0.91
APTR-204ENST00000440088 SLC4A5Q9BY07 1137 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 C11orf49Q9H6J7 331 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 TMEM39AQ9NV64 488 aa20.75■□□□□ 0.91
APTR-204ENST00000440088 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.75■□□□□ 0.91
APTR-204ENST00000440088 I3L4J1 428 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 TULP2O00295 520 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 HOXA2O43364 376 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 RGS7P49802 495 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 PIGHQ14442 188 aaPredicted RBP20.74■□□□□ 0.91
APTR-204ENST00000440088 CLUL1Q15846 466 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 TCTN1Q2MV58 587 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 TMEM110Q86TL2 294 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 COLGALT2Q8IYK4 626 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 MMGT1Q8N4V1 131 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 SUSD3Q96L08 255 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 SYT15Q9BQS2 421 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 RNF216Q9NWF9 866 aaPredicted RBP20.74■□□□□ 0.91
APTR-204ENST00000440088 CDH9Q9ULB4 789 aa20.74■□□□□ 0.91
APTR-204ENST00000440088 B4GALT3O60512 393 aa20.73■□□□□ 0.91
APTR-204ENST00000440088 CLTBP09497 229 aa20.73■□□□□ 0.91
APTR-204ENST00000440088 RFC1P35251 1148 aaPredicted RBP20.73■□□□□ 0.91
APTR-204ENST00000440088 SLC8A3P57103 927 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms