RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 NRBP2Q9NSY0 501 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 CEP83Q9Y592 693 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 ATP2A1O14983 1001 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 GRAP2O75791 330 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 ATG7O95352 703 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 PRKCBP05771 671 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 RPL22P35268 128 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 GCLCP48506 637 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 PIGHQ14442 188 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 SGSM1Q2NKQ1 1148 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 EEF1DP3Q658K8 133 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 WDR49Q8IV35 697 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 FBXO36Q8NEA4 188 aa14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 UTP4Q969X6 686 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 MRPL4Q9BYD3 311 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-204ENST00000439977 C3orf70A6NLC5 250 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 AVILO75366 819 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 UNC5CO95185 931 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 PGK2P07205 417 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 ABHD2P08910 425 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 CXCL8P10145 99 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 ASPAP45381 313 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 PPP1R15BQ5SWA1 713 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 ASRGL1Q7L266 308 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 UBR7Q8N806 425 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 KCTD6Q8NC69 237 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 TWNKQ96RR1 684 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 ACO2Q99798 780 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 GINM1Q9NU53 330 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 HOXC10Q9NYD6 342 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 CHMP2BQ9UQN3 213 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 TMEM63AO94886 807 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 SETDB1Q15047 1291 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 MAPK6Q16659 721 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 CDO1Q16878 200 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 DALRD3Q5D0E6 543 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 RNF43Q68DV7 783 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 ZNF772Q68DY9 489 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 PALM2Q8IXS6 379 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 SLC35B2Q8TB61 432 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 UBA3Q8TBC4 463 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 MAGEC3Q8TD91 643 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 TTC25Q96NG3 672 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 NIFKQ9BYG3 293 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 GEMIN8Q9NWZ8 242 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 BTBD7Q9P203 1132 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 SLC17A7Q9P2U7 560 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 RABGEF1Q9UJ41 708 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 ACTL7BQ9Y614 415 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 NUMBLQ9Y6R0 609 aa14.23□□□□□ -0.13
HERPUD1-204ENST00000439977 OGTO15294 1046 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 ARIH2O95376 493 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 ITGAVP06756 1048 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 CLNS1AP54105 237 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 OAZ1P54368 228 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 IGBP1P78318 339 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 SLC25A11Q02978 314 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 MCL1Q07820 350 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 TARBP2Q15633 366 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 SEPT7Q16181 437 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 OTOAQ7RTW8 1153 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 IGDCC3Q8IVU1 814 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 CCHCR1Q8TD31 782 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 PAFAH2Q99487 392 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 XYLT2Q9H1B5 865 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 PCDH9Q9HC56 1237 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 UBN1Q9NPG3 1134 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 PSMC3IPQ9P2W1 217 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 DRG1Q9Y295 367 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 TYROBPO43914 113 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 ERBB2P04626 1255 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 HOXC6P09630 235 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 ENPEPQ07075 957 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 NAA25Q14CX7 972 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 PLEKHG4Q58EX7 1191 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 TRPM4Q8TD43 1214 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 TCP10LQ8TDR4 215 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 ZNF75CPQ92670 426 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 NKD2Q969F2 451 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 SDCBP2Q9H190 292 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 ASCC2Q9H1I8 757 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 TMEM134Q9H6X4 195 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 SMYD3Q9H7B4 428 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 XPO7Q9UIA9 1087 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 FER1L6Q2WGJ9 1857 aa14.22□□□□□ -0.13
HERPUD1-204ENST00000439977 SOWAHBA6NEL2 793 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 EDF1O60869 148 aaKnown RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 MAFO75444 373 aaPredicted RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 KDELR1P24390 212 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 CLCN3P51790 818 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 RIPK1Q13546 671 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 PDK4Q16654 411 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 DRICH1Q6PGQ1 229 aaPredicted RBP14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 CCDC33Q8N5R6 958 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 COPS5Q92905 334 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 KLRG1Q96E93 195 aa14.21□□□□□ -0.13
HERPUD1-204ENST00000439977 MINDY3Q9H8M7 445 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms