RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 GIPC2Q8TF65 315 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 MYLPFQ96A32 169 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 CNOT6LQ96LI5 555 aaKnown RBP17.44■□□□□ 0.38
CTSD-205ENST00000438213 CEP295NLQ96MC4 621 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 MED15Q96RN5 788 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 NT5C1AQ9BXI3 368 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 GPR88Q9GZN0 384 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 MUTYHQ9UIF7 546 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 NME7Q9Y5B8 376 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 C5orf42Q9H799 3197 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 ATP8B3O60423 1300 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 LRRN2O75325 713 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 ATF6P18850 670 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 ANXA13P27216 316 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 MTIF2P46199 727 aaKnown RBP17.43■□□□□ 0.38
CTSD-205ENST00000438213 YWHAEP62258 255 aaKnown RBP17.43■□□□□ 0.38
CTSD-205ENST00000438213 INCA1Q0VD86 236 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 DDR2Q16832 855 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 SLC5A9Q2M3M2 681 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 PRSS36Q5K4E3 855 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 ACOT1Q86TX2 421 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 ING5Q8WYH8 240 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 TATDN2Q93075 761 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 LPIN3Q9BQK8 851 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 MED10Q9BTT4 135 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 LRRC3Q9BY71 257 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 ELOVL4Q9GZR5 314 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 DPEP3Q9H4B8 488 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 KCNK12Q9HB15 430 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 SORCS3Q9UPU3 1222 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 MYO10Q9HD67 2058 aa17.43■□□□□ 0.38
CTSD-205ENST00000438213 TRIM66O15016 1216 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 CD58P19256 250 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 TBXAS1P24557 533 aaPredicted RBP17.42■□□□□ 0.38
CTSD-205ENST00000438213 STX1AQ16623 288 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 PTPN21Q16825 1174 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 ARHGAP15Q53QZ3 475 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 MTSS1LQ765P7 747 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 IRF2BP1Q8IU81 584 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 NPAS3Q8IXF0 933 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 EHBP1Q8NDI1 1231 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 ENOX1Q8TC92 643 aaKnown RBP17.42■□□□□ 0.38
CTSD-205ENST00000438213 GPR152Q8TDT2 470 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 TCEAL4Q96EI5 215 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 MCRS1Q96EZ8 462 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 SPATA17Q96L03 361 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 GCNAQ96QF7 691 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 B3GNT5Q9BYG0 378 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 EHD2Q9NZN4 543 aa17.42■□□□□ 0.38
CTSD-205ENST00000438213 UXTQ9UBK9 157 aaPredicted RBP17.42■□□□□ 0.38
CTSD-205ENST00000438213 CILPO75339 1184 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 LETM1O95202 739 aaPredicted RBP17.41■□□□□ 0.38
CTSD-205ENST00000438213 ASGR2P07307 311 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 CEBPBP17676 345 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 GABRR2P28476 465 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 CDC25CP30307 473 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 CCR2P41597 374 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 GPR15P49685 360 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 LRMPQ12912 555 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 MTMR3Q13615 1198 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 TMC8Q8IU68 726 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 UBALD2Q8IYN6 164 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 EDAQ92838 391 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSD-205ENST00000438213 C8orf48Q96LL4 319 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 NT5C1BQ96P26 610 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 C1QTNF1Q9BXJ1 281 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 ATXN3LQ9H3M9 355 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 EPHX3Q9H6B9 360 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 CISHQ9NSE2 258 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 TMEM63CQ9P1W3 806 aa17.41■□□□□ 0.38
CTSD-205ENST00000438213 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
CTSD-205ENST00000438213 DENND4AQ7Z401 1863 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 SLC38A8A6NNN8 435 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 PRKCSHP14314 528 aaPredicted RBP17.4■□□□□ 0.38
CTSD-205ENST00000438213 ZXDAP98168 799 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 TDGQ13569 410 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 CUL2Q13617 745 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 SDHAF4Q5VUM1 108 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
CTSD-205ENST00000438213 SHKBP1Q8TBC3 707 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
CTSD-205ENST00000438213 ZNF518BQ9C0D4 1074 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 ZNF334Q9HCZ1 680 aaPredicted RBP17.4■□□□□ 0.38
CTSD-205ENST00000438213 ZMYM5Q9UJ78 669 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
CTSD-205ENST00000438213 CLDN5O00501 218 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 MOSPD3O75425 235 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 NOL4O94818 638 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 HMGA1P17096 107 aaKnown RBP17.39■□□□□ 0.37
CTSD-205ENST00000438213 GJA1P17302 382 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 HTR4Q13639 388 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 TEAD2Q15562 447 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 MAN2A1Q16706 1144 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 KLHL40Q2TBA0 621 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms