RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PPP3CCP48454 512 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC6Q16204 474 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 MAP7D1Q3KQU3 841 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 GNASQ5JWF2 1037 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ANKRD40Q6AI12 368 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PIWIL4Q7Z3Z4 852 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ANKS1BQ7Z6G8 1248 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 HEXDCQ8WVB3 486 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 MAGOHBQ96A72 148 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 MLXIPQ9HAP2 919 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 HSFX1Q9UBD0 423 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 GDAQ9Y2T3 454 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ZSWIM8A7E2V4 1837 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LRRD1A4D1F6 860 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SPATA31C2B4DYI2 1134 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PALMO75781 387 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 DNAJB5O75953 348 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LSP1P33241 339 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SUOXP51687 545 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 TSPY1Q01534 308 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SCARF1Q14162 830 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 KRT81Q14533 505 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 TMEM132DQ14C87 1099 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PDCD2Q16342 344 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 TIGD7Q6NT04 549 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 CDC42EP5Q6NZY7 148 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 TSPEARQ8WU66 669 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 SLC10A4Q96EP9 437 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 FUBP3Q96I24 572 aaKnown RBP eCLIP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 METTL2AQ96IZ6 378 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 ZFRQ96KR1 1074 aaKnown RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 NR1H4Q96RI1 486 aaPredicted RBP3.94□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC40Q9H9A6 602 aa3.94□□□□□ -1.78
SHPRH-205ENST00000433355 PAPPA2Q9BXP8 1791 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SLC15A5A6NIM6 579 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 EIF3FO00303 357 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 TPSB2P20231 275 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PROZP22891 400 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PON1P27169 355 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 GNGT1P63211 74 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 IRX5P78411 483 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 HERC3Q15034 1050 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 TPSAB1Q15661 275 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZACNQ401N2 412 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CATSPER3Q86XQ3 398 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DCP1BQ8IZD4 617 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 KIAA0895Q8NCT3 520 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CLMNQ96JQ2 1002 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 C7orf26Q96N11 449 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CDC42EP4Q9H3Q1 356 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 NLRC4Q9NPP4 1024 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MPP6Q9NZW5 540 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 POTEB3A0JP26 581 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DENND3A2RUS2 1198 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 MYMKA6NI61 221 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SEC31AO94979 1220 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 KRT1P04264 644 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SUPT20HL2P0C7V6 817 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CPA3P15088 417 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SPRP35270 261 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF827Q17R98 1081 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 HEATR6Q6AI08 1181 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 POTEBQ6S5H4 581 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DDX42Q86XP3 938 aaKnown RBP eCLIP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SCML4Q8N228 414 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 GPRC5AQ8NFJ5 357 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 WDR60Q8WVS4 1066 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 KCTD13Q8WZ19 329 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 EZH1Q92800 747 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SOX13Q9UN79 622 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 POLBP06746 335 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF143P52747 638 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 LINC00299Q6ZSB3 139 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 TSHZ1Q6ZSZ6 1077 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 METTL23Q86XA0 190 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CRLF3Q8IUI8 442 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC33Q8N5R6 958 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PDZD8Q8NEN9 1154 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PPTC7Q8NI37 304 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 IL25Q9H293 177 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CPSF2Q9P2I0 782 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CNOT8Q9UFF9 292 aaKnown RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DCDC2Q9UHG0 476 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SFI1A8K8P3 1242 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 APOEP02649 317 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 AKR1B1P15121 316 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 CALB2P22676 271 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 STAT5BP51692 787 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PMS2P54278 862 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 ROR1Q01973 937 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 TTC39BQ5VTQ0 682 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 DAB2IPQ5VWQ8 1189 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 HGSNATQ68CP4 663 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 USP50Q70EL3 339 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-205ENST00000433355 SLC20A1Q8WUM9 679 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PPP2R3CQ969Q6 453 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 PPP1R14BQ96C90 147 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 TSSK1BQ9BXA7 367 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 NMRK1Q9NWW6 199 aa3.93□□□□□ -1.78
SHPRH-205ENST00000433355 BARX2Q9UMQ3 279 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms