RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 HAPLN1P10915 354 aaPredicted RBP15.31■□□□□ 0.04
CSTF3-202ENST00000431742 RFX1P22670 979 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 ELF1P32519 619 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 MAGEA11P43364 429 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 KLK7P49862 253 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 FANCCQ00597 558 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 UBXN1Q04323 297 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 ITIH3Q06033 890 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 SMAD4Q13485 552 aaKnown RBP15.31■□□□□ 0.04
CSTF3-202ENST00000431742 SYCP1Q15431 976 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 LEXMQ3ZCV2 418 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 PPM1LQ5SGD2 360 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 RARS2Q5T160 578 aaKnown RBP15.31■□□□□ 0.04
CSTF3-202ENST00000431742 KLHDC7AQ5VTJ3 777 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 IQCEQ6IPM2 695 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 CYP26C1Q6V0L0 522 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 EP400NLQ6ZTU2 488 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 PAQR9Q6ZVX9 377 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 GPR149Q86SP6 731 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
CSTF3-202ENST00000431742 FUKQ8N0W3 1084 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 RNF214Q8ND24 703 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 SHC3Q92529 594 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 SUSD6Q92537 303 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 B3GNT5Q9BYG0 378 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 ADAM7Q9H2U9 754 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 THEGQ9P2T0 379 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 C5orf42Q9H799 3197 aa15.31■□□□□ 0.04
CSTF3-202ENST00000431742 CCDC195A0A1B0GUA6 201 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 ATF6P18850 670 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 CYP2F1P24903 491 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 TUFMP49411 452 aaKnown RBP15.3■□□□□ 0.04
CSTF3-202ENST00000431742 CDR1P51861 262 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 MFAP3P55082 362 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 TFF2Q03403 129 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 NR1I3Q14994 352 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 CLUL1Q15846 466 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 ZNF394Q53GI3 561 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 TMEM270Q6UE05 265 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 TMC5Q6UXY8 1006 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 C12orf29Q8N999 325 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.3■□□□□ 0.04
CSTF3-202ENST00000431742 TMEM176AQ96HP8 235 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 ZNF518BQ9C0D4 1074 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 TMEM30AQ9NV96 361 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 DNAJC12Q9UKB3 198 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 SLC27A5Q9Y2P5 690 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 DAAM1Q9Y4D1 1078 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 PCDHB4Q9Y5E5 795 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
CSTF3-202ENST00000431742 A0A1W2PQC6 194 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 GRXCR2A6NFK2 248 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 RNF225M0QZC1 329 aaPredicted RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 EPHB6O15197 1021 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 MBTPS2O43462 519 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 SOAT2O75908 522 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 SERPINC1P01008 464 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 PAEPP09466 180 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 CCDC130P13994 396 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 UCHL3P15374 230 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 TRIM21P19474 475 aaKnown RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 TWF1Q12792 350 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 PLD1Q13393 1074 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 MGAT5BQ3V5L5 792 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 FILIP1LQ4L180 1135 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 ARHGAP17Q68EM7 881 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 VSTM1Q6UX27 236 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 FAM35AQ86V20 835 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 RBBP8NLQ8NC74 664 aaPredicted RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 SEPT5Q99719 369 aaPredicted RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 HNRNPABQ99729 332 aaKnown RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 APOL5Q9BWW9 433 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 GPR88Q9GZN0 384 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 DNAI2Q9GZS0 605 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 FAM49BQ9NUQ9 324 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 CEP72Q9P209 647 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 CDH22Q9UJ99 828 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 USP15Q9Y4E8 981 aaPredicted RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 UNC80Q8N2C7 3258 aa15.29■□□□□ 0.04
CSTF3-202ENST00000431742 TCF20Q9UGU0 1960 aaKnown RBP15.29■□□□□ 0.04
CSTF3-202ENST00000431742 ATP8B3O60423 1300 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 CLDN5O00501 218 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 CCL16O15467 120 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 XYLBO75191 536 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 LRG1P02750 347 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 BDNFP23560 247 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 PBX1P40424 430 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 CACNA2D1P54289 1103 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 ARHGAP44Q17R89 818 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 CES5AQ6NT32 575 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 SLC2A14Q8TDB8 520 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 SMG7Q92540 1137 aaKnown RBP15.28■□□□□ 0.04
CSTF3-202ENST00000431742 SMARCD1Q96GM5 515 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 RBSNQ9H1K0 784 aa15.28■□□□□ 0.04
CSTF3-202ENST00000431742 FAM207AQ9NSI2 230 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms