RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 NSRP1Q9H0G5 558 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 SDCBP2Q9H190 292 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 DENND2DQ9H6A0 471 aaPredicted RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
COL28A1-202ENST00000430711 PCSK1NQ9UHG2 260 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ADGRA2Q96PE1 1338 aa7.56□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF638Q14966 1978 aaKnown RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 PHIPQ8WWQ0 1821 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SGK1O00141 431 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 WDR46O15213 610 aaKnown RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 PSTPIP1O43586 416 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 GNAZP19086 355 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 GBP1P32455 592 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 RPL22P35268 128 aaKnown RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 CCNHP51946 323 aaPredicted RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 JAK3P52333 1124 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 KRT76Q01546 638 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SLC25A11Q02978 314 aaKnown RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 NCOA4Q13772 614 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 MDH1BQ5I0G3 518 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 RNF43Q68DV7 783 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 TRIM68Q6AZZ1 485 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 MTDHQ86UE4 582 aaKnown RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 PHF13Q86YI8 300 aaPredicted RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 FBF1Q8TES7 1133 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 MSTO1Q9BUK6 570 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 JPH1Q9HDC5 661 aaPredicted RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SCUBE2Q9NQ36 999 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 ARL8BQ9NVJ2 186 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 DONSONQ9NYP3 566 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SLC17A6Q9P2U8 582 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 TCEAL9Q9UHQ7 104 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 NFASCO94856 1347 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 A0A0B4J269 797 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 CCDC189A1A4V9 331 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 CFAP73A6NFT4 308 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 F5H423 210 aaPredicted RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 LRCH4O75427 683 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 DPEP1P16444 411 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 GARTP22102 1010 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 MARK3P27448 753 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 CPA2P48052 419 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 VCPP55072 806 aaKnown RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 TGFB2P61812 414 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 MAP3K10Q02779 954 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 NR1H3Q13133 447 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 PRKG1Q13976 671 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 EAPPQ56P03 285 aaPredicted RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 ATG14Q6ZNE5 492 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 LONP2Q86WA8 852 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 RHPN2Q8IUC4 686 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 LRRC71Q8N4P6 559 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 CCDC89Q8N998 374 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 FAM71DQ8N9W8 422 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SLC35B2Q8TB61 432 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 TCP10LQ8TDR4 215 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 DCAKDQ8WVC6 231 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 ZNF75CPQ92670 426 aaPredicted RBP7.55□□□□□ -1.2
COL28A1-202ENST00000430711 FNBP1Q96RU3 617 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 KCNK13Q9HB14 408 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 ARHGEF4Q9NR80 690 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 NKIRAS1Q9NYS0 192 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 ARMCX1Q9P291 453 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 EXOC7Q9UPT5 735 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 CHMP2BQ9UQN3 213 aa7.55□□□□□ -1.2
COL28A1-202ENST00000430711 SPDYE5A6NIY4 337 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 CXorf49A8MYA2 514 aaPredicted RBP7.54□□□□□ -1.2
COL28A1-202ENST00000430711 TBC1D12O60347 775 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 ATG7O95352 703 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 C1QAP02745 245 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 ERBB2P04626 1255 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 IQCF3P0C7M6 154 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 HSPA8P11142 646 aaKnown RBP7.54□□□□□ -1.2
COL28A1-202ENST00000430711 CD1EP15812 388 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 SLC8A1P32418 973 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 SLC1A1P43005 524 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 SESN3P58005 492 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 PLCB3Q01970 1234 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 STRN3Q13033 797 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 SPARCL1Q14515 664 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 STAT4Q14765 748 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 PDK4Q16654 411 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 KHDC1Q4VXA5 237 aaKnown RBP7.54□□□□□ -1.2
COL28A1-202ENST00000430711 CYP4V2Q6ZWL3 525 aaPredicted RBP7.54□□□□□ -1.2
COL28A1-202ENST00000430711 RELL1Q8IUW5 271 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 FBXO36Q8NEA4 188 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 GRK7Q8WTQ7 553 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 UCMAQ8WVF2 138 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 WDR60Q8WVS4 1066 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 CPXM1Q96SM3 734 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 PAFAH2Q99487 392 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 SENP7Q9BQF6 1050 aa7.54□□□□□ -1.2
COL28A1-202ENST00000430711 STMN4Q9H169 189 aaPredicted RBP7.54□□□□□ -1.2
COL28A1-202ENST00000430711 LRMDAQ9H2I8 198 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms