RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 MAFGO15525 162 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 PFDN1O60925 122 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 ENTPD5O75356 428 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 PAEPP09466 180 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 CALB2P22676 271 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 ADORA2BP29275 332 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 HOXD13P35453 343 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 STK32AQ8WU08 396 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 GPRASP2Q96D09 838 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 FAM49BQ9NUQ9 324 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 GPATCH2LQ9NWQ4 482 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 NFS1Q9Y697 457 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 OATP04181 439 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 ELK3P41970 407 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
CPNE4-201ENST00000429747 ITKQ08881 620 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 RASA2Q15283 850 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 DNAL1Q4LDG9 190 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 FSCBQ5H9T9 825 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 TTC39BQ5VTQ0 682 aaPredicted RBP13.2□□□□□ -0.3
CPNE4-201ENST00000429747 CCNYL1Q8N7R7 359 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 RMDN2Q96LZ7 410 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 RNPEPL1Q9HAU8 725 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 MAMLD1Q13495 774 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 SNX30Q5VWJ9 437 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 RDM1Q8NG50 284 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
CPNE4-201ENST00000429747 CCDC78A2IDD5 438 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 ATP9AO75110 1047 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 PHKA2P46019 1235 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SH3BGRP55822 239 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 TRIP10Q15642 601 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 MFSD5Q6N075 450 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 BZW1Q7L1Q6 419 aaKnown RBP13.19□□□□□ -0.3
CPNE4-201ENST00000429747 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SIX6OS1Q8N1H7 587 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 GABPB2Q8TAK5 448 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-201ENST00000429747 RAP1GAPP47736 663 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 UGCGQ16739 394 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 LRRC23Q53EV4 343 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-201ENST00000429747 LENG9Q96B70 501 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 NEMP1O14524 444 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 GIPC1O14908 333 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SPAG6O75602 509 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 STIP1P31948 543 aaKnown RBP13.19□□□□□ -0.3
CPNE4-201ENST00000429747 AQP5P55064 265 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SPATA33Q96N06 139 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
CPNE4-201ENST00000429747 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 ATP9BO43861 1147 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 LCP1P13796 627 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 MED21Q13503 144 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 PRPSAP1Q14558 356 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 KRT80Q6KB66 452 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 PRPF31Q8WWY3 499 aaKnown RBP13.18□□□□□ -0.3
CPNE4-201ENST00000429747 A0A1W2PPM1 405 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 A8MXQ7 604 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 FCHO1O14526 889 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 GPD1P21695 349 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 SEPT6Q14141 434 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 Q3C1V9 767 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 SLC25A41Q8N5S1 370 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 ICA1LQ8NDH6 482 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 FAF1Q9UNN5 650 aaPredicted RBP13.18□□□□□ -0.3
CPNE4-201ENST00000429747 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 GMNNO75496 209 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 TAC1P20366 129 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 PIGWQ7Z7B1 504 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 ZNF280CQ8ND82 737 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
CPNE4-201ENST00000429747 BFARQ9NZS9 450 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 SLC4A7Q9Y6M7 1214 aa13.18□□□□□ -0.3
CPNE4-201ENST00000429747 LAMA4Q16363 1823 aa13.17□□□□□ -0.3
CPNE4-201ENST00000429747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
CPNE4-201ENST00000429747 KBTBD13C9JR72 458 aa13.17□□□□□ -0.3
CPNE4-201ENST00000429747 OGTO15294 1046 aa13.17□□□□□ -0.3
CPNE4-201ENST00000429747 LIASO43766 372 aa13.17□□□□□ -0.3
CPNE4-201ENST00000429747 MGRN1O60291 552 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms