RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
DDX39B-209ENST00000428450 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
DDX39B-209ENST00000428450 KIAA1522Q9P206 1035 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-209ENST00000428450 ARHGAP28Q9P2N2 729 aa12.47□□□□□ -0.41
DDX39B-209ENST00000428450 PCDHB9Q9Y5E1 797 aa12.47□□□□□ -0.41
DDX39B-209ENST00000428450 TTC26A0AVF1 554 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 CCDC169A6NNP5 214 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 AP5Z1O43299 807 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 NEMFO60524 1076 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 DTNBO60941 627 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 TADA3O75528 432 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 CXCL8P10145 99 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 HARSP12081 509 aaKnown RBP12.46□□□□□ -0.41
DDX39B-209ENST00000428450 RPA1P27694 616 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 IFNAR2P48551 515 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 GUCY2FP51841 1108 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 LILRA4P59901 499 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 ZNF33AQ06730 810 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 MESP2Q0VG99 397 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 USP4Q13107 963 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 BYSLQ13895 437 aaKnown RBP12.46□□□□□ -0.41
DDX39B-209ENST00000428450 ZNF843Q8N446 348 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 ALLCQ8N6M5 410 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 TXNDC5Q8NBS9 432 aaKnown RBP12.46□□□□□ -0.41
DDX39B-209ENST00000428450 MRPS31Q92665 395 aaKnown RBP12.46□□□□□ -0.41
DDX39B-209ENST00000428450 SENP8Q96LD8 212 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 PLEKHA5Q9HAU0 1116 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 APOBEC2Q9Y235 224 aaKnown RBP12.46□□□□□ -0.41
DDX39B-209ENST00000428450 ATMQ13315 3056 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 MGAQ8IWI9 3026 aa12.46□□□□□ -0.41
DDX39B-209ENST00000428450 OBSL1O75147 1896 aa12.46□□□□□ -0.42
DDX39B-209ENST00000428450 TRABD2BA6NFA1 517 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 ADAM23O75077 832 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 DKK1O94907 266 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 KLF8O95600 359 aaPredicted RBP12.45□□□□□ -0.42
DDX39B-209ENST00000428450 CYP11A1P05108 521 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 SYPP08247 313 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 PEX3P56589 373 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 NR1H3Q13133 447 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 STK3Q13188 491 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 ECM1Q16610 540 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 EMC10Q5UCC4 262 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
DDX39B-209ENST00000428450 RABEPKQ7Z6M1 372 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 MARCH9Q86YJ5 346 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 DAW1Q8N136 415 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 STKLD1Q8NE28 680 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 SPPL2BQ8TCT7 592 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 C2orf15Q8WU43 125 aaKnown RBP12.45□□□□□ -0.42
DDX39B-209ENST00000428450 HMGB4Q8WW32 186 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 TOR4AQ9NXH8 423 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 UBQLN1Q9UMX0 589 aaKnown RBP12.45□□□□□ -0.42
DDX39B-209ENST00000428450 UNC79Q9P2D8 2635 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 PTPRQQ9UMZ3 2332 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
DDX39B-209ENST00000428450 CEP192Q8TEP8 1941 aa12.45□□□□□ -0.42
DDX39B-209ENST00000428450 A0A0A0MRY4 1105 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 TOM1L1O75674 476 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 ODC1P11926 461 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 XBP1P17861 261 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 PSMA5P28066 241 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 TIE1P35590 1138 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-209ENST00000428450 GPR15P49685 360 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 RPL6Q02878 288 aaKnown RBP12.44□□□□□ -0.42
DDX39B-209ENST00000428450 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.421e-323■■■■□ 24.5
DDX39B-209ENST00000428450 HSF5Q4G112 596 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-209ENST00000428450 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 RUFY3Q7L099 469 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 SLC41A1Q8IVJ1 513 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 LSM14AQ8ND56 463 aaKnown RBP12.44□□□□□ -0.42
DDX39B-209ENST00000428450 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 HAPLN2Q9GZV7 340 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 BHMT2Q9H2M3 363 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 TMEM206Q9H813 350 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDX39B-209ENST00000428450 PCOLCE2Q9UKZ9 415 aa12.44□□□□□ -0.42
DDX39B-209ENST00000428450 MYO18AQ92614 2054 aaKnown RBP12.44□□□□□ -0.42
DDX39B-209ENST00000428450 KNTC1P50748 2209 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 STK36Q9NRP7 1315 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 A0A1W2PQD8 194 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 TCRBV21S2A2A0A5A6 115 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 USP17L7P0C7H9 530 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 CSH1P0DML2 217 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 CSH2P0DML3 217 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 TCF3P15923 654 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 KRT2P35908 639 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 ABCG1P45844 678 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 SLC6A11P48066 632 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 ZXDBP98169 803 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 MCL1Q07820 350 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 SMARCB1Q12824 385 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 ZC2HC1CQ53FD0 456 aaPredicted RBP12.43□□□□□ -0.42
DDX39B-209ENST00000428450 SH3RF2Q8TEC5 729 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 PRORYQ9H606 182 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 ZDHHC4Q9NPG8 344 aa12.43□□□□□ -0.42
DDX39B-209ENST00000428450 TMLHEQ9NVH6 421 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms