RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MYH2Q9UKX2 1941 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ATAD5Q96QE3 1844 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 KIF13AQ9H1H9 1805 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 NWD2Q9ULI1 1742 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 KDM3AQ9Y4C1 1321 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 A0A087X0T9 212 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 A0A0G2JND7 137 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ANKRD62A6NC57 917 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM25EA8MYX2 175 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 B2RBV5 119 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM25AB3EWG3 89 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM25CB3EWG5 89 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM25GB3EWG6 89 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 B4E1Z4 1266 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 EYA2O00167 538 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SPTLC1O15269 473 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC16A3O15427 465 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TEX28O15482 410 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SIAH2O43255 324 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 KCNQ3O43525 872 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLRC4O43908 158 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM189A1O60320 539 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 MAN1A2O60476 641 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLHL41O60662 606 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SPAG6O75602 509 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ACSL3O95573 720 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 STAMBPO95630 424 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TFAP2AP05549 437 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CCNYL3P0C7X3 344 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FAM228BP0C875 321 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PABPC1P11940 636 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ALAS1P13196 640 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 P4HA1P13674 534 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CCDC130P13994 396 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PDE6AP16499 860 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CCNCP24863 283 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 HOXD10P28358 340 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PMLP29590 882 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 COILP38432 576 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GRIK1P39086 918 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC1A1P43005 524 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GPD2P43304 727 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 RPL21P46778 160 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 RFX5P48382 616 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 NEK3P51956 506 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 THOP1P52888 689 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 VCPP55072 806 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PFKPQ01813 784 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FKBP4Q02790 459 aaKnown RBP eCLIP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 MTMR2Q13614 643 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 COL9A3Q14050 684 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PDE1CQ14123 709 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF846Q147U1 533 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMED2Q15363 201 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CYTH1Q15438 398 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF174Q15697 407 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PTPRNQ16849 979 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 MYLK3Q32MK0 819 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 KCTD21Q4G0X4 260 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FSCBQ5H9T9 825 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 WDR45BQ5MNZ6 344 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CCNJQ5T5M9 372 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 OGFRL1Q5TC84 451 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 LGSNQ5TDP6 509 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 METTL21CQ5VZV1 264 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SCARA3Q6AZY7 606 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 DESI1Q6ICB0 168 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CGB2Q6NT52 195 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PPP1R2P3Q6NXS1 205 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 USP49Q70CQ1 688 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 HDDC2Q7Z4H3 204 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 FRMD5Q7Z6J6 570 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PCGF5Q86SE9 256 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SETD3Q86TU7 594 aaPredicted RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 SAPCD2Q86UD0 394 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRABD2AQ86V40 505 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CCDC33Q8N5R6 958 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PCYOX1LQ8NBM8 494 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 LILRB4Q8NHJ6 448 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZFP28Q8NHY6 868 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GSDMBQ8TAX9 411 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 GIMAP1Q8WWP7 306 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 CDKL2Q92772 493 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 OSBP2Q969R2 916 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMA16Q96EY4 203 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 EDC3Q96F86 508 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PLEKHA8Q96JA3 519 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 MAGED4Q96JG8 741 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 ACAP3Q96P50 834 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 PPP1R10Q96QC0 940 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 MIPEPQ99797 713 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 DDX50Q9BQ39 737 aaKnown RBP5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 TUBA1CQ9BQE3 449 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 HEPHQ9BQS7 1158 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 AIFM2Q9BRQ8 373 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 EFHD1Q9BUP0 239 aa5.86□□□□□ -1.47
VTI1BP4-201ENST00000427516 OSBPL11Q9BXB4 747 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms