RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ATP2A1O14983 1001 aa15.07■□□□□ 0
MSH5-206ENST00000423982 YY1P25490 414 aa15.07■□□□□ 0
MSH5-206ENST00000423982 SLC1A1P43005 524 aa15.07■□□□□ 0
MSH5-206ENST00000423982 NFX1Q12986 1120 aaKnown RBP15.07■□□□□ 0
MSH5-206ENST00000423982 TFDP1Q14186 410 aa15.07■□□□□ 0
MSH5-206ENST00000423982 MSS51Q4VC12 460 aa15.07■□□□□ 0
MSH5-206ENST00000423982 TTC7BQ86TV6 843 aa15.07■□□□□ 0
MSH5-206ENST00000423982 RIOX2Q8IUF8 465 aa15.07■□□□□ 0
MSH5-206ENST00000423982 WDR60Q8WVS4 1066 aa15.07■□□□□ 0
MSH5-206ENST00000423982 TEKT4Q8WW24 435 aa15.07■□□□□ 0
MSH5-206ENST00000423982 ZNF333Q96JL9 665 aa15.07■□□□□ 0
MSH5-206ENST00000423982 TSC22D3Q99576 134 aa15.07■□□□□ 0
MSH5-206ENST00000423982 FAM213AQ9BRX8 229 aa15.07■□□□□ 0
MSH5-206ENST00000423982 LRRD1A4D1F6 860 aa15.07■□□□□ 0
MSH5-206ENST00000423982 NVLO15381 856 aaKnown RBP15.07■□□□□ 0
MSH5-206ENST00000423982 TLR3O15455 904 aaKnown RBP15.07■□□□□ 0
MSH5-206ENST00000423982 SP100P23497 879 aaPredicted RBP15.07■□□□□ 0
MSH5-206ENST00000423982 NPTX2P47972 431 aa15.07■□□□□ 0
MSH5-206ENST00000423982 KLC1Q07866 573 aa15.07■□□□□ 0
MSH5-206ENST00000423982 NR1H3Q13133 447 aa15.07■□□□□ 0
MSH5-206ENST00000423982 WDR72Q3MJ13 1102 aa15.07■□□□□ 0
MSH5-206ENST00000423982 WASHC2DQ5SRD0 308 aa15.07■□□□□ 0
MSH5-206ENST00000423982 RGS9BPQ6ZS82 235 aa15.07■□□□□ 0
MSH5-206ENST00000423982 NLRX1Q86UT6 975 aa15.07■□□□□ 0
MSH5-206ENST00000423982 RIBC1Q8N443 379 aaPredicted RBP15.07■□□□□ 0
MSH5-206ENST00000423982 TMEM161BQ8NDZ6 487 aa15.07■□□□□ 0
MSH5-206ENST00000423982 TCP10LQ8TDR4 215 aa15.07■□□□□ 0
MSH5-206ENST00000423982 AVENQ9NQS1 362 aaPredicted RBP15.07■□□□□ 0
MSH5-206ENST00000423982 HEY2Q9UBP5 337 aa15.07■□□□□ 0
MSH5-206ENST00000423982 KAT6AQ92794 2004 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SIGLEC16A6NMB1 481 aa15.06■□□□□ 0
MSH5-206ENST00000423982 C2CD2LO14523 706 aa15.06■□□□□ 0
MSH5-206ENST00000423982 NR3C2P08235 984 aa15.06■□□□□ 0
MSH5-206ENST00000423982 QARSP47897 775 aaKnown RBP15.06■□□□□ 0
MSH5-206ENST00000423982 CYP24A1Q07973 514 aa15.06■□□□□ 0
MSH5-206ENST00000423982 MTMR1Q13613 665 aa15.06■□□□□ 0
MSH5-206ENST00000423982 RCN2Q14257 317 aa15.06■□□□□ 0
MSH5-206ENST00000423982 CCDC6Q16204 474 aa15.06■□□□□ 0
MSH5-206ENST00000423982 NBPF20Q3BBV1 942 aa15.06■□□□□ 0
MSH5-206ENST00000423982 XKR9Q5GH70 373 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SNX30Q5VWJ9 437 aa15.06■□□□□ 0
MSH5-206ENST00000423982 ANKRD22Q5VYY1 191 aa15.06■□□□□ 0
MSH5-206ENST00000423982 ZNF276Q8N554 614 aa15.06■□□□□ 0
MSH5-206ENST00000423982 RBBP8NLQ8NC74 664 aaPredicted RBP15.06■□□□□ 0
MSH5-206ENST00000423982 BBOF1Q8ND07 529 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SH3GL3Q99963 347 aa15.06■□□□□ 0
MSH5-206ENST00000423982 ZCWPW1Q9H0M4 648 aa15.06■□□□□ 0
MSH5-206ENST00000423982 CLUHO75153 1309 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SERPINB3P29508 390 aa15.06■□□□□ 0
MSH5-206ENST00000423982 CPA2P48052 419 aa15.06■□□□□ 0
MSH5-206ENST00000423982 NCKAP1LP55160 1127 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SLC45A4Q5BKX6 768 aa15.06■□□□□ 0
MSH5-206ENST00000423982 RINLQ6ZS11 566 aa15.06■□□□□ 0
MSH5-206ENST00000423982 KATNAL2Q8IYT4 538 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SCG3Q8WXD2 468 aaKnown RBP15.06■□□□□ 0
MSH5-206ENST00000423982 FAM136AQ96C01 138 aa15.06■□□□□ 0
MSH5-206ENST00000423982 RIT2Q99578 217 aa15.06■□□□□ 0
MSH5-206ENST00000423982 PPP1R12CQ9BZL4 782 aa15.06■□□□□ 0
MSH5-206ENST00000423982 DCLRE1BQ9H816 532 aa15.06■□□□□ 0
MSH5-206ENST00000423982 SMG5Q9UPR3 1016 aaKnown RBP15.06■□□□□ 0
MSH5-206ENST00000423982 C2CD2Q9Y426 696 aa15.06■□□□□ 0
MSH5-206ENST00000423982 MYH9P35579 1960 aaKnown RBP15.05■□□□□ 0
MSH5-206ENST00000423982 TRAFD1O14545 582 aaPredicted RBP15.05■□□□□ 0
MSH5-206ENST00000423982 PMM2O15305 246 aa15.05■□□□□ 0
MSH5-206ENST00000423982 ATP9AO75110 1047 aa15.05■□□□□ 0
MSH5-206ENST00000423982 TBX10O75333 385 aa15.05■□□□□ 0
MSH5-206ENST00000423982 ACADSP16219 412 aa15.05■□□□□ 0
MSH5-206ENST00000423982 MRPS35P82673 323 aaKnown RBP15.05■□□□□ 0
MSH5-206ENST00000423982 PLCB3Q01970 1234 aa15.05■□□□□ 0
MSH5-206ENST00000423982 TSNAXIP1Q2TAA8 658 aa15.05■□□□□ 0
MSH5-206ENST00000423982 SYCP2LQ5T4T6 812 aa15.05■□□□□ 0
MSH5-206ENST00000423982 FOXB2Q5VYV0 432 aa15.05■□□□□ 0
MSH5-206ENST00000423982 SLC30A9Q6PML9 568 aa15.05■□□□□ 0
MSH5-206ENST00000423982 NSUN6Q8TEA1 469 aaKnown RBP15.05■□□□□ 0
MSH5-206ENST00000423982 WDR83Q9BRX9 315 aaKnown RBP15.05■□□□□ 0
MSH5-206ENST00000423982 PAPOLBQ9NRJ5 636 aaKnown RBP15.05■□□□□ 0
MSH5-206ENST00000423982 ARMCX1Q9P291 453 aa15.05■□□□□ 0
MSH5-206ENST00000423982 IVNS1ABPQ9Y6Y0 642 aa15.05■□□□□ 0
MSH5-206ENST00000423982 E7ENQ6 273 aa15.05■□□□□ -0
MSH5-206ENST00000423982 CAPN9O14815 690 aa15.05■□□□□ -0
MSH5-206ENST00000423982 PSTPIP1O43586 416 aa15.05■□□□□ -0
MSH5-206ENST00000423982 CYP1A1P04798 512 aaPredicted RBP15.05■□□□□ -0
MSH5-206ENST00000423982 FESP07332 822 aa15.05■□□□□ -0
MSH5-206ENST00000423982 MAPTP10636 758 aaKnown RBP15.05■□□□□ -0
MSH5-206ENST00000423982 GLRA2P23416 452 aa15.05■□□□□ -0
MSH5-206ENST00000423982 RASSF2P50749 326 aa15.05■□□□□ -0
MSH5-206ENST00000423982 NRLP54845 237 aa15.05■□□□□ -0
MSH5-206ENST00000423982 DYNLT1P63172 113 aa15.05■□□□□ -0
MSH5-206ENST00000423982 ALCAMQ13740 583 aa15.05■□□□□ -0
MSH5-206ENST00000423982 TKFCQ3LXA3 575 aa15.05■□□□□ -0
MSH5-206ENST00000423982 FNBP1LQ5T0N5 605 aa15.05■□□□□ -0
MSH5-206ENST00000423982 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ -0
MSH5-206ENST00000423982 TDRPQ86YL5 185 aa15.05■□□□□ -0
MSH5-206ENST00000423982 ZNF784Q8NCA9 323 aaPredicted RBP15.05■□□□□ -0
MSH5-206ENST00000423982 CHST13Q8NET6 341 aa15.05■□□□□ -0
MSH5-206ENST00000423982 GPRC5AQ8NFJ5 357 aa15.05■□□□□ -0
MSH5-206ENST00000423982 EXD1Q8NHP7 514 aa15.05■□□□□ -0
MSH5-206ENST00000423982 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.05■□□□□ -0
MSH5-206ENST00000423982 TLE6Q9H808 572 aa15.05■□□□□ -0
MSH5-206ENST00000423982 C1orf112Q9NSG2 853 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms