RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 BBOX1O75936 387 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 TGDSO95455 350 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 PYGBP11216 843 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 YWHABP31946 246 aaKnown RBP17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 PHBP35232 272 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 LRRC36Q1X8D7 754 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 CDHR3Q6ZTQ4 885 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 IGDCC3Q8IVU1 814 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 PCDH9Q9HC56 1237 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 MAGEC1O60732 1142 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 CDK7P50613 346 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 WNT7BP56706 349 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 PSMC5P62195 406 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 ZC3H12AQ5D1E8 599 aaKnown RBP17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 CES4AQ5XG92 561 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 MYLK4Q86YV6 388 aaPredicted RBP17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 TMPRSS6Q8IU80 811 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 ARHGAP24Q8N264 748 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 IL31RAQ8NI17 732 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 FEZF2Q8TBJ5 459 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 NCSTNQ92542 709 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 ST6GALNAC4Q9H4F1 302 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 PPARGC1AQ9UBK2 798 aaKnown RBP17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 CHMP2BQ9UQN3 213 aa17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 DRG1Q9Y295 367 aaKnown RBP17.47■□□□□ 0.39
NPC1L1-203ENST00000423141 hCG_1818297A0A087WSY0 165 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 F8W8V4 182 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 DHX15O43143 795 aaKnown RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 TMEM63AO94886 807 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 NPTX2P47972 431 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 NRLP54845 237 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 MCCD1P59942 119 aaPredicted RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 ACTR3P61158 418 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 OGDHQ02218 1023 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 FAAP100Q0VG06 881 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 MTMR2Q13614 643 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 KLHL38Q2WGJ6 581 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 LRRC23Q53EV4 343 aaPredicted RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 CFAP157Q5JU67 520 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 SYCP2LQ5T4T6 812 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 TMEM270Q6UE05 265 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 CHSY1Q86X52 802 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 PALM2Q8IXS6 379 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 RIT2Q99578 217 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 SENP7Q9BQF6 1050 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 MXRA8Q9BRK3 442 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 FAM213AQ9BRX8 229 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 STK32BQ9NY57 414 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 MARCOQ9UEW3 520 aaPredicted RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 SNCAIPQ9Y6H5 919 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 MYH9P35579 1960 aaKnown RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 ITGAVP06756 1048 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 KITP10721 976 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 CRABP2P29373 138 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 RBM5P52756 815 aaKnown RBP eCLIP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 USP4Q13107 963 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 PTK7Q13308 1070 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 C1orf146Q5VVC0 180 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 NET1Q7Z628 596 aaPredicted RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 MAP4K3Q8IVH8 894 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 NAT8LQ8N9F0 302 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 TMC2Q8TDI7 906 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 ALKBH8Q96BT7 664 aaKnown RBP17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 CNTN3Q9P232 1028 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 STRIP2Q9ULQ0 834 aa17.46■□□□□ 0.39
NPC1L1-203ENST00000423141 KAT6AQ92794 2004 aa17.46■□□□□ 0.38
NPC1L1-203ENST00000423141 MEI4A8MW99 385 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 GRIA2P42262 883 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ENOSF1Q7L5Y1 443 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ABRAQ8N0Z2 381 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ACER1Q8TDN7 264 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 NKD2Q969F2 451 aaPredicted RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 APOPT1Q96IL0 206 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 FETUBQ9UGM5 382 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 G3BP2Q9UN86 482 aaKnown RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 CCDC195A0A1B0GUA6 201 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 A6NJR5 290 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 BUD23O43709 281 aaKnown RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 FAM155BO75949 473 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 TM7SF2O76062 418 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ACO1P21399 889 aaKnown RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 GNA15P30679 374 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 AP2B1P63010 937 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 SH2D5Q6ZV89 423 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 PPIL6Q8IXY8 311 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ITFG2Q969R8 447 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 FBXL18Q96ME1 805 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 MCEEQ96PE7 176 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 ZNF536O15090 1300 aa17.45■□□□□ 0.38
NPC1L1-203ENST00000423141 CIB2O75838 187 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms