RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 AP1M1Q9BXS5 423 aa8.83□□□□□ -1
USP54-203ENST00000418501 KLK14Q9P0G3 267 aa8.83□□□□□ -1
USP54-203ENST00000418501 O00370 1275 aa8.83□□□□□ -1
USP54-203ENST00000418501 GHRP10912 638 aa8.83□□□□□ -1
USP54-203ENST00000418501 ELNP15502 786 aa8.83□□□□□ -1
USP54-203ENST00000418501 PDGFRAP16234 1089 aa8.83□□□□□ -1
USP54-203ENST00000418501 PCK1P35558 622 aa8.83□□□□□ -1
USP54-203ENST00000418501 PDCLQ13371 301 aa8.83□□□□□ -1
USP54-203ENST00000418501 TUSC3Q13454 348 aa8.83□□□□□ -1
USP54-203ENST00000418501 FAM26DQ5JW98 314 aa8.83□□□□□ -1
USP54-203ENST00000418501 CCDC137Q6PK04 289 aaKnown RBP8.83□□□□□ -1
USP54-203ENST00000418501 SLC24A5Q71RS6 500 aa8.83□□□□□ -1
USP54-203ENST00000418501 RFX6Q8HWS3 928 aa8.83□□□□□ -1
USP54-203ENST00000418501 CRYBG2Q8N1P7 616 aa8.83□□□□□ -1
USP54-203ENST00000418501 EIF2AQ9BY44 585 aaKnown RBP8.83□□□□□ -1
USP54-203ENST00000418501 OSBPL8Q9BZF1 889 aa8.83□□□□□ -1
USP54-203ENST00000418501 SIX4Q9UIU6 781 aa8.83□□□□□ -1
USP54-203ENST00000418501 ARID2Q68CP9 1835 aa8.83□□□□□ -1
USP54-203ENST00000418501 EP400Q96L91 3159 aa8.83□□□□□ -1
USP54-203ENST00000418501 TMEM191CA6NGB0 347 aa8.83□□□□□ -1
USP54-203ENST00000418501 ARVCFO00192 962 aa8.83□□□□□ -1
USP54-203ENST00000418501 ADAMTS4O75173 837 aa8.83□□□□□ -1
USP54-203ENST00000418501 F9P00740 461 aa8.83□□□□□ -1
USP54-203ENST00000418501 ITIH2P19823 946 aa8.83□□□□□ -1
USP54-203ENST00000418501 HOXA11P31270 313 aaPredicted RBP8.83□□□□□ -1
USP54-203ENST00000418501 GABPB1Q06547 395 aaPredicted RBP8.83□□□□□ -1
USP54-203ENST00000418501 SMARCB1Q12824 385 aa8.83□□□□□ -1
USP54-203ENST00000418501 CASP8Q14790 479 aa8.83□□□□□ -1
USP54-203ENST00000418501 CCNG2Q16589 344 aa8.83□□□□□ -1
USP54-203ENST00000418501 NFE2Q16621 373 aaPredicted RBP8.83□□□□□ -1
USP54-203ENST00000418501 TMEM63BQ5T3F8 832 aa8.83□□□□□ -1
USP54-203ENST00000418501 MRPL10Q7Z7H8 261 aaKnown RBP8.83□□□□□ -1
USP54-203ENST00000418501 SLC4A11Q8NBS3 891 aa8.83□□□□□ -1
USP54-203ENST00000418501 NOA1Q8NC60 698 aaKnown RBP8.83□□□□□ -1
USP54-203ENST00000418501 ADAM2Q99965 735 aa8.83□□□□□ -1
USP54-203ENST00000418501 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.83□□□□□ -1
USP54-203ENST00000418501 PADI3Q9ULW8 664 aa8.83□□□□□ -1
USP54-203ENST00000418501 ZNF148Q9UQR1 794 aa8.83□□□□□ -1
USP54-203ENST00000418501 PTPRJQ12913 1337 aa8.83□□□□□ -1
USP54-203ENST00000418501 EFCAB14O75071 495 aa8.82□□□□□ -1
USP54-203ENST00000418501 ABL1P00519 1130 aa8.82□□□□□ -1
USP54-203ENST00000418501 ADORA2BP29275 332 aa8.82□□□□□ -1
USP54-203ENST00000418501 ADCY8P40145 1251 aa8.82□□□□□ -1
USP54-203ENST00000418501 RAP1GAPP47736 663 aa8.82□□□□□ -1
USP54-203ENST00000418501 DRG2P55039 364 aaKnown RBP8.82□□□□□ -1
USP54-203ENST00000418501 SARNPP82979 210 aaKnown RBP8.82□□□□□ -1
USP54-203ENST00000418501 SLC6A3Q01959 620 aa8.82□□□□□ -1
USP54-203ENST00000418501 GLRA4Q5JXX5 417 aa8.82□□□□□ -1
USP54-203ENST00000418501 SCYL2Q6P3W7 929 aa8.82□□□□□ -1
USP54-203ENST00000418501 ACOT1Q86TX2 421 aa8.82□□□□□ -1
USP54-203ENST00000418501 FMO2Q99518 471 aa8.82□□□□□ -1
USP54-203ENST00000418501 ANKZF1Q9H8Y5 726 aa8.82□□□□□ -1
USP54-203ENST00000418501 INPP5FQ9Y2H2 1132 aa8.82□□□□□ -1
USP54-203ENST00000418501 PIRO00625 290 aa8.82□□□□□ -1
USP54-203ENST00000418501 DDX3YO15523 660 aaKnown RBP8.82□□□□□ -1
USP54-203ENST00000418501 TYMPP19971 482 aa8.82□□□□□ -1
USP54-203ENST00000418501 HOXC8P31273 242 aa8.82□□□□□ -1
USP54-203ENST00000418501 VSNL1P62760 191 aa8.82□□□□□ -1
USP54-203ENST00000418501 CAVIN3Q969G5 261 aa8.82□□□□□ -1
USP54-203ENST00000418501 FAM149B1Q96BN6 582 aa8.82□□□□□ -1
USP54-203ENST00000418501 LENG1Q96BZ8 264 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 MS4A14Q96JA4 679 aa8.82□□□□□ -1
USP54-203ENST00000418501 STK39Q9UEW8 545 aa8.82□□□□□ -1
USP54-203ENST00000418501 A0A0U1RQF3 1178 aa8.82□□□□□ -1
USP54-203ENST00000418501 LRRC37A2A6NM11 1700 aa8.82□□□□□ -1
USP54-203ENST00000418501 DNM1LO00429 736 aa8.82□□□□□ -1
USP54-203ENST00000418501 DAPK3O43293 454 aa8.82□□□□□ -1
USP54-203ENST00000418501 ADCY6O43306 1168 aa8.82□□□□□ -1
USP54-203ENST00000418501 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 NEBLO76041 1014 aa8.82□□□□□ -1
USP54-203ENST00000418501 CCND3P30281 292 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 TFDP3Q5H9I0 405 aa8.82□□□□□ -1
USP54-203ENST00000418501 DENND1BQ6P3S1 775 aa8.82□□□□□ -1
USP54-203ENST00000418501 SENP8Q96LD8 212 aa8.82□□□□□ -1
USP54-203ENST00000418501 SYT15Q9BQS2 421 aa8.82□□□□□ -1
USP54-203ENST00000418501 ERP44Q9BS26 406 aa8.82□□□□□ -1
USP54-203ENST00000418501 ELOVL4Q9GZR5 314 aa8.82□□□□□ -1
USP54-203ENST00000418501 ERVK-5Q9HDB9 667 aa8.82□□□□□ -1
USP54-203ENST00000418501 METTL5Q9NRN9 209 aaKnown RBP8.82□□□□□ -1
USP54-203ENST00000418501 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.82□□□□□ -1
USP54-203ENST00000418501 SALL4Q9UJQ4 1053 aa8.82□□□□□ -1
USP54-203ENST00000418501 XPO1O14980 1071 aaKnown RBP8.82□□□□□ -1
USP54-203ENST00000418501 COILP38432 576 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 ZNF143P52747 638 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 AIF1P55008 147 aa8.82□□□□□ -1
USP54-203ENST00000418501 XKR4Q5GH76 650 aa8.82□□□□□ -1
USP54-203ENST00000418501 DENND2CQ68D51 928 aa8.82□□□□□ -1
USP54-203ENST00000418501 LRIG3Q6UXM1 1119 aa8.82□□□□□ -1
USP54-203ENST00000418501 SPATA2LQ8IUW3 424 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 SMARCD1Q96GM5 515 aa8.82□□□□□ -1
USP54-203ENST00000418501 FRMD8Q9BZ67 464 aaPredicted RBP8.82□□□□□ -1
USP54-203ENST00000418501 PCYOX1Q9UHG3 505 aa8.82□□□□□ -1
USP54-203ENST00000418501 SLC12A6Q9UHW9 1150 aa8.82□□□□□ -1
USP54-203ENST00000418501 PHF24Q9UPV7 400 aa8.82□□□□□ -1
USP54-203ENST00000418501 H3BRJ5 948 aa8.81□□□□□ -1
USP54-203ENST00000418501 FSCN2O14926 492 aa8.81□□□□□ -1
USP54-203ENST00000418501 CD52P31358 61 aa8.81□□□□□ -1
USP54-203ENST00000418501 GBP2P32456 591 aaPredicted RBP8.81□□□□□ -1
USP54-203ENST00000418501 GABRB2P47870 512 aa8.81□□□□□ -1
USP54-203ENST00000418501 CDH8P55286 799 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms