RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 DUSP23Q9BVJ7 150 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 SSBP4Q9BWG4 385 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 RNPEPQ9H4A4 650 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 PRKRIP1Q9H875 184 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 NYAP2Q9P242 653 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 IRAK3Q9Y616 596 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 ZFP37Q9Y6Q3 630 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 SPTAN1Q13813 2472 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 C2orf16Q68DN1 1984 aa6.09□□□□□ -1.43
ECHDC1-206ENST00000417628 LAMA4Q16363 1823 aa6.09□□□□□ -1.44
ECHDC1-206ENST00000417628 MYH8P13535 1937 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM181BA6NEQ2 426 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 TMEM232C9JQI7 657 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 NFIBO00712 420 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PRODHO43272 600 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PPFIA4O75335 1185 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 RFPL3O75679 317 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CAVIN2O95810 425 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CFBP00751 764 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 ITGA4P13612 1032 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 HOXA6P31267 233 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 ABCD1P33897 745 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 IGBP1P78318 339 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CREB5Q02930 508 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 TFCP2Q12800 502 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 NOLC1Q14978 699 aaKnown RBP eCLIP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM102BQ5T8I3 360 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 AP1ARQ63HQ0 302 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 KLHL10Q6JEL2 608 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 MMS22LQ6ZRQ5 1243 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SEPT14Q6ZU15 432 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 GPR155Q7Z3F1 870 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 TRIM59Q8IWR1 403 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 RBM12BQ8IXT5 1001 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SLC39A11Q8N1S5 342 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 LRRC43Q8N309 656 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CXorf38Q8TB03 319 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SYTL5Q8TDW5 730 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 AUTS2Q8WXX7 1259 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SMG7Q92540 1137 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 NINJ1Q92982 152 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PHKBQ93100 1093 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SNX21Q969T3 373 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 KIF1BPQ96EK5 621 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 LIN37Q96GY3 246 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 Q96M66 194 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CDC6Q99741 560 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SH3GL3Q99963 347 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 C16orf70Q9BSU1 422 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 MTA3Q9BTC8 594 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CRNKL1Q9BZJ0 848 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 TRIM4Q9C037 500 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 ZBP1Q9H171 429 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 TMX1Q9H3N1 280 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 AGO3Q9H9G7 860 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PIH1D3Q9NQM4 214 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 HEBP1Q9NRV9 189 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CHCHD3Q9NX63 227 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PSD3Q9NYI0 1048 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 CGGBP1Q9UFW8 167 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PA2G4Q9UQ80 394 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 FHOD1Q9Y613 1164 aa6.08□□□□□ -1.44
ECHDC1-206ENST00000417628 SHROOM3Q8TF72 1996 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 CCDC195A0A1B0GUA6 201 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 BCLAF3A2AJT9 711 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 MAN2B1O00754 1011 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 PLD2O14939 933 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 INPPL1O15357 1258 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 IDH1O75874 414 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 AKAP3O75969 853 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 CTSAP10619 480 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 U2AF2P26368 475 aaKnown RBP eCLIP6.07□□□□□ -1.449e-7■■■■■ 27
ECHDC1-206ENST00000417628 ITPKBP27987 946 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 IL12RB1P42701 662 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 CLCN4P51793 760 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 RARSP54136 660 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 HNRNPH2P55795 449 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 GPS2Q13227 327 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 LY6DQ14210 128 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 WDR43Q15061 677 aaKnown RBP eCLIP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 SF1Q15637 639 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 SLC5A9Q2M3M2 681 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 TEX35Q5T0J7 233 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 TAF2Q6P1X5 1199 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 PAOXQ6QHF9 649 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 LEKR1Q6ZMV7 388 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 BEND4Q6ZU67 534 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 TMC3Q7Z5M5 1100 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 PIP4P1Q86T03 277 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 SRLQ86TD4 932 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 VPS52Q8N1B4 723 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 GMCL1P1Q8NEA9 526 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 ZNF397Q8NF99 534 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms