RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 INTS2Q9H0H0 1204 aaKnown RBP24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 NDST4Q9H3R1 872 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CISHQ9NSE2 258 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 CEP72Q9P209 647 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 ATP8B3O60423 1300 aa24.59■■□□□ 1.53
SMARCB1-205ENST00000417137 PES1O00541 588 aaKnown RBP24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 ZNF197O14709 1029 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 RHOP08100 348 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 CDK11BP21127 795 aaKnown RBP24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 ZNF165P49910 485 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 PLCD3Q8N3E9 789 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 PPM1KQ8N3J5 372 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 FAM81BQ96LP2 452 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 FUCA2Q9BTY2 467 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 AVENQ9NQS1 362 aaPredicted RBP24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 ASAH2Q9NR71 780 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 GCNT4Q9P109 453 aa24.58■■□□□ 1.53
SMARCB1-205ENST00000417137 SOAT2O75908 522 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 CAVIN2O95810 425 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 BDNFP23560 247 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 SSTR3P32745 418 aaPredicted RBP24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 EXOC3L4Q17RC7 722 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 ZSCAN23Q3MJ62 389 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 PDZD4Q76G19 769 aaPredicted RBP24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 DNAJB7Q7Z6W7 309 aaPredicted RBP24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 AOPEPQ8N6M6 819 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 PSMG2Q969U7 264 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 CEP295NLQ96MC4 621 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 MED10Q9BTT4 135 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 ELOVL4Q9GZR5 314 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 HCFC1R1Q9NWW0 138 aa24.57■■□□□ 1.52
SMARCB1-205ENST00000417137 C19orf67A6NJJ6 358 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 LOC730098B7Z3J9 87 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 FGF19O95750 216 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 GRIK1P39086 918 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 GCNT1Q02742 428 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 CCDC142Q17RM4 750 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 SCN4BQ8IWT1 228 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 GJD3Q8N144 294 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 TDRD5Q8NAT2 981 aaKnown RBP24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 ARID3AQ99856 593 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 CRACR2AQ9BSW2 395 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 B3GNT5Q9BYG0 378 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 MRPS23Q9Y3D9 190 aaKnown RBP24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 ZFP37Q9Y6Q3 630 aaPredicted RBP24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 XIRP2A4UGR9 3374 aa24.56■■□□□ 1.52
SMARCB1-205ENST00000417137 BECN2A8MW95 431 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 TRIM66O15016 1216 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 CSH1P0DML2 217 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 CSH2P0DML3 217 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 ATF6P18850 670 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 ANXA13P27216 316 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 GBP2P32456 591 aaPredicted RBP24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 NTHL1P78549 312 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 NCAPHQ15003 741 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 DDR2Q16832 855 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 MIIPQ5JXC2 388 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 WHAMMQ8TF30 809 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 GIPC2Q8TF65 315 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 JAKMIP2Q96AA8 810 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 TMEM176AQ96HP8 235 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 HEXIM2Q96MH2 286 aaKnown RBP24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 LPIN3Q9BQK8 851 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 HMGXB4Q9UGU5 601 aa24.55■■□□□ 1.52
SMARCB1-205ENST00000417137 MICAL2O94851 1124 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 ORC1Q13415 861 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 KRT31Q15323 416 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 ZNF394Q53GI3 561 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 TRIM65Q6PJ69 517 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 GET4Q7L5D6 327 aaPredicted RBP24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 ENOSF1Q7L5Y1 443 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 TWNKQ96RR1 684 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 TAB2Q9NYJ8 693 aa24.54■■□□□ 1.52
SMARCB1-205ENST00000417137 MYL4P12829 197 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 SLC9A1P19634 815 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 SP100P23497 879 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 EPHA5P54756 1037 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 MFAP3P55082 362 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 PHLDB3Q6NSJ2 640 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 RRAGAQ7L523 313 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 ZDHHC14Q8IZN3 488 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 HS6ST3Q8IZP7 471 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 CYFIP2Q96F07 1278 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 SMARCD1Q96GM5 515 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 SPATA17Q96L03 361 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 C8orf48Q96LL4 319 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 NECAB3Q96P71 396 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 ZNF518BQ9C0D4 1074 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 VPS16Q9H269 839 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 UBE2TQ9NPD8 197 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 EHD2Q9NZN4 543 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 LIMA1Q9UHB6 759 aaKnown RBP24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 KIAA1257Q9ULG3 409 aa24.53■■□□□ 1.52
SMARCB1-205ENST00000417137 C2CD4DB7Z1M9 353 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 CLDN5O00501 218 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 PON1P27169 355 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 GPR15P49685 360 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 RAD23BP54727 409 aa24.52■■□□□ 1.52
SMARCB1-205ENST00000417137 FKBP15Q5T1M5 1219 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms